JSON

Genome sc|0002325

Name

“Oleincola secundus”

Database

NCBI Assembly

Accession

GCA_018400375.1

Genomics

Accession
NCBI Assembly:GCA_018400375.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 84.75%
  • Contamination: 0.0%
  • Quality: 84.75
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 14 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 34.84%
  • Coding Density: 87.43%
  • Codon Table: 11
  • N50: 5,398 bp
  • Contigs: 464
  • Largest Contig: 26,510 bp
  • Assembly Length: 2,010,173 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 5 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2010-07-21
Location
Lat Lon: 54.25 N 90.13 E
Toponym
Geo Loc Name: Russia: Republic of Khakassia, Shirinsky District, Lake Shunet
Environment
Sample Type: metagenomic assembly
Isolation Source: 5.5 m monimolimnion layer of meromictic lake
Env Broad Scale: meromictic lake
Env Local Scale: monimolimnion
Env Medium: saline lake water
Other
Depth: 5.5
Package
Ncbi Submission Package: MIMAG.water.5.0
Biosamplemodel: MIMAG.water
Additional Accessions
SAMN18740207
All retrieved samples
Metadata retrieved 5 months ago


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