Genome sc|0002343

Genomics

Accession

NCBI Assembly:GCA_040224245.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 93.4%
• Contamination: 1.9%
• Quality: 83.9

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

24.6 ×

Source

• SRA: SRR22428450

Other features

• G+C Content: 54.18%
• Coding Density: 90.07%
• Codon Table: 11
• N50: 67,950 bp
• Contigs: 100
• Largest Contig: 138,570 bp
• Assembly Length: 3,890,274 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 5 months ago

Sample Metadata

BioSample entries

• BioSample: SRS15881744

Date

Collection Date: 2022-02-16

Location

Lat Lon: 8.3752 N 78.0637 E

Toponym

Geo Loc Name: India:Manapad Beach

Environment

Isolation Source: flat gracilaria

Other

Host: not available

Package

Biosamplemodel: Metagenome or environmental

All retrieved samples

• SRS15881744: algae metagenome

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Metadata retrieved 5 months ago