JSON

Genome sc|0000235

Name

“Companilactobacillus pullicola”

Database

NCBI Assembly

Accession

GCA_019116025.1

Genomics

Accession
NCBI Assembly:GCA_019116025.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.57%
  • Contamination: 3.26%
  • Quality: 80.27
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 15 amino acids
Source
Other features
  • G+C Content: 35.87%
  • Coding Density: 86.95%
  • Codon Table: 11
  • N50: 53,709 bp
  • Contigs: 99
  • Largest Contig: 170,541 bp
  • Assembly Length: 2,933,924 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015
Location
Geographic Location Latitude: 42.7339 N
Geographic Location Longitude: 25.4858 E
Toponym
Geographic Location Country And Or Sea: Germany
Environment
Sample Type: metagenomic assembly
Environment Biome: poultry
Environment Feature: gut
Other
Host: Gallus gallus
Package
Ena Checklist: ERC000013
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
Additional Accessions
ERR2241697
All retrieved samples
Metadata retrieved 11 months ago


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