JSON

Genome sc|0000241

Name

“Alistipes intestinigallinarum”

Database

NCBI Assembly

Accession

GCA_019115745.1

Genomics

Accession
NCBI Assembly:GCA_019115745.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.93%
  • Contamination: 0.48%
  • Quality: 91.53
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Source
Other features
  • G+C Content: 60.01%
  • Coding Density: 91.29%
  • Codon Table: 11
  • N50: 51,184 bp
  • Contigs: 80
  • Largest Contig: 148,076 bp
  • Assembly Length: 2,637,875 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015-09-16
Location
Not detected
Toponym
Geo Loc Name: China:Hunan
Environment
Sample Type: metagenomic assembly
Isolation Source: colorectum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323129
All retrieved samples
Metadata retrieved 11 months ago


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