JSON

Genome sc|0000254

Name

“Limosilactobacillus merdigallinarum”

Database

NCBI Assembly

Accession

GCA_019114515.1

Genomics

Accession
NCBI Assembly:GCA_019114515.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.45%
  • Contamination: 3.46%
  • Quality: 82.15
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 44.07%
  • Coding Density: 87.13%
  • Codon Table: 11
  • N50: 114,460 bp
  • Contigs: 32
  • Largest Contig: 235,226 bp
  • Assembly Length: 1,564,634 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015-10-17
Location
Not detected
Toponym
Geo Loc Name: China:Shanxi
Environment
Sample Type: metagenomic assembly
Isolation Source: jejunum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323373
All retrieved samples
Metadata retrieved 11 months ago


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