SeqCode Registry
cognitis nomina
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Genomes
sc|0002751
JSON
Genome sc|0002751
Database
NCBI Assembly
Accession
SRS22020357
Genomics
Accession
NCBI Assembly:
SRS22020357
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
99.93%
Contamination:
1.82%
Quality:
90.83
Ribosomal and transfer RNA genes
5 16S rRNAs (up to 97.0%)
5 23S rRNAs (up to 89.4%)
tRNAs for 20 amino acids
Sequencing depth
73.0 ×
Source
BioSample: SAMN43406632
Other features
G+C Content:
42.52%
Automated checks
Failed: Cannot find ncbi:assembly:SRS22020357
Last modified
3 months ago
Sample Metadata
BioSample entries
BioSample: SAMN43406632
Date
Collection Date:
2022-05-27
Location
Not detected
Toponym
Not detected
Environment
Sample Type:
cell culture
Isolation Source:
Foliar
Other
Host:
plant-associated
Package
Ncbi Package:
Microbe.1.0
All retrieved samples
SAMN43406632
: WGS-endobacterial
Metadata retrieved
3 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN43406632
×
strain
AGC35
isolate
Endophytes isolate
host
plant-associated
isolation_source
Foliar
collection_date
2022-05-27
geo_loc_name
not provided
sample_type
cell culture
ncbi_package
Microbe.1.0
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