SeqCode Registry
cognitis nomina
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Genomes
sc|0003069
JSON
Genome sc|0003069
Name
“Hesperobacter lustricola”
Database
NCBI Assembly
Accession
GCA_003133025.1
Genomics
Accession
NCBI Assembly:
GCA_003133025.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
86.09%
Contamination:
2.78%
Quality:
72.19
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 20 amino acids
Sequencing depth
12.9 ×
Source
BioSample: SAMN08179397
Other features
G+C Content:
66.5%
Coding Density:
92.11%
Codon Table:
11
N50:
18,032 bp
Contigs:
265
Largest Contig:
103,315 bp
Assembly Length:
3,346,495 bp
Ambiguous Assembly Fraction:
0.081%
Submitter comments
Completeness estimated with CheckM
Automated checks
Complete
Last modified
3 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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