Genome sc|0003070


Database

NCBI Assembly

Accession

GCA_003133185.1

Genomics

Accession
NCBI Assembly:GCA_003133185.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 70.01%
  • Contamination: 0.93%
  • Quality: 65.36
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 15 amino acids
Sequencing depth
15.7 ×
Source
Other features
  • G+C Content: 62.0%
  • Coding Density: 90.37%
  • Codon Table: 11
  • N50: 11,199 bp
  • Contigs: 307
  • Largest Contig: 56,964 bp
  • Assembly Length: 2,548,763 bp
  • Ambiguous Assembly Fraction: 0.36%
Automated checks
Complete

Last modified 9 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2012-05-04
Location
Lat Lon: 68.3535 N 19.0472 E
Toponym
Geo Loc Name: Sweden: Stordalen Mire
Environment
Sample Type: metagenomic assembly
Isolation Source: permafrost active layer soil
Other
Depth: 0.01-0.05
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 9 days ago


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