JSON

Genome sc|0003079

Name

“Elarobacter beijerinckii”

Database

NCBI Assembly

Accession

GCA_003135555.1

Genomics

Accession
NCBI Assembly:GCA_003135555.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 84.44%
  • Contamination: 3.32%
  • Quality: 67.84
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
28.1 ×
Source
Other features
  • G+C Content: 68.0%
  • Coding Density: 93.0%
  • Codon Table: 11
  • N50: 55,506 bp
  • Contigs: 98
  • Largest Contig: 285,492 bp
  • Assembly Length: 3,570,161 bp
  • Ambiguous Assembly Fraction: 0.024%
Automated checks
Complete
Last modified 9 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011-10-16
Location
Lat Lon: 68.3535 N 19.0471 E
Toponym
Geo Loc Name: Sweden: Stordalen Mire
Environment
Sample Type: metagenomic assembly
Isolation Source: permafrost active layer soil
Other
Depth: 0.26-0.29
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 9 days ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license