JSON

Genome sc|0003086

Name

“Elarobacter pasteuri”

Database

NCBI Assembly

Accession

GCA_003161435.1

Genomics

Accession
NCBI Assembly:GCA_003161435.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 83.42%
  • Contamination: 0.05%
  • Quality: 83.17
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
53.0 ×
Source
Other features
  • G+C Content: 67.0%
  • Coding Density: 91.72%
  • Codon Table: 11
  • N50: 128,765 bp
  • Contigs: 44
  • Largest Contig: 339,005 bp
  • Assembly Length: 3,833,552 bp
  • Ambiguous Assembly Fraction: 0.017%
Automated checks
Complete
Last modified 9 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011-06-15
Location
Lat Lon: 68.3535 N 19.0471 E
Toponym
Geo Loc Name: Sweden: Stordalen Mire
Environment
Sample Type: metagenomic assembly
Isolation Source: permafrost active layer soil
Other
Depth: 0.12-0.15
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 9 days ago


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