Genome sc|0003485


Database

INSDC Nucleotide

Accession

CAXCYR000000000.1

Genomics

Accession
INSDC Nucleotide:CAXCYR000000000.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.7%
  • Contamination: 0.0%
  • Quality: 95.7
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 73.0%)
  • 1 23S rRNA (up to 50.0%)
  • tRNAs for 18 amino acids
Sequencing depth
12.0 ×
Source
Other features
  • G+C Content: 59.5%
  • Coding Density: 86.0%
  • Codon Table: 11
  • N50: 58,221 bp
  • Contigs: 97
  • Largest Contig: 163,778 bp
  • Assembly Length: 3,172,694 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 4 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-12-28
Location
Not detected
Toponym
Geographic Location Country And Or Sea: Spain
Environment
Not detected
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 4 months ago

Sequencing Experiments

Illumina NovaSeq 6000 paired end sequencing


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license