JSON

Genome sc|0000363

Database

NCBI Assembly

Accession

SAMN20205123

Genomics

Accession
NCBI Assembly:SAMN20205123
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 89.27%
  • Contamination: 3.34%
  • Quality: 72.57
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 46.0%)
  • tRNAs for 18 amino acids
Sequencing depth
11.25 ×
Source
Other features
  • G+C Content: 65.54%
Submitter comments
CheckM v1.0.11 was used to determine MAG completeness and contamination. Barrnap v0.7 was used to extract 16S rRNA gene sequences from the MAG and assess sequence completion. G/C content was calculated as a ratio of the entire genome. Assessed tRNAs with tRNAscan-SE v.2.0.12 and counted only distinct, standard tRNA.
Automated checks
Failed: Cannot find ncbi:assembly:SAMN20205123
Last modified over 1 year ago


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