JSON

Genome sc|0003675

Name

“Spongivicinius caligobacter”

Database

INSDC Nucleotide

Accession

SAMN42181022

Genomics

Accession
INSDC Nucleotide:SAMN42181022
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.44%
  • Contamination: 0.0%
  • Quality: 97.44
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
11.0 ×
Source
Other features
  • G+C Content: 59.0%
Submitter comments
CheckM1 (v1.2.2) values are reported above, CheckM2 (v1.0.1) completeness and contamination is 97.35% and 2.69%, respectively. barrnap (v0.9) was used for rRNA genes and tRNAscan-SE (v2.0.11) was used to find tRNAs. 
Automated checks
Failed: Cannot find ncbi:nuccore:SAMN42181022
Last modified 2 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
Metadata retrieved 2 months ago


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