Genome sc|0000392

Genomics

Accession

NCBI Assembly:GCA_029962705.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.16%
• Contamination: 1.77%
• Quality: 85.31

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 18 amino acids

Sequencing depth

21.3 ×

Source

• BioSample: SAMEA5958381

Other features

• G+C Content: 48.0%
• Coding Density: 89.08%
• Codon Table: 11
• N50: 24,761 bp
• Contigs: 213
• Largest Contig: 115,824 bp
• Assembly Length: 2,684,900 bp
• Ambiguous Assembly Fraction: 0.11%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2012-03-25

Location

Geographic Location Latitude: -61,24361

Geographic Location Longitude: -57,07361

Toponym

Geographic Location Country And Or Sea: Southern Ocean

Environment

Environment Biome: ocean biome [ENVO:01000048]

Environment Feature: microbial feature [ENVO:01000007]

Other

Geographic Location Depth: 20

Package

Ena Checklist: ERC000024

All retrieved samples

• SAMEA5958381: ANT28_241

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Metadata retrieved 5 months ago