SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0000004
JSON
Genome sc|0000004
Database
NCBI Assembly
Accession
JAJEQY000000000
Genomics
Accession
NCBI Assembly:
JAJEQY000000000
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.1%
Contamination:
2.8%
Quality:
84.1
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 62.0%)
tRNAs for 20 amino acids
Sequencing depth
50.0 ×
Source
BioSample: PRJNA767532
Other features
G+C Content:
59.83%
Coding Density:
88.68%
Codon Table:
11
N50:
33,302 bp
Contigs:
191
Largest Contig:
120,635 bp
Assembly Length:
3,730,270 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
Search
×
Names
Publications
Authors
Subjects