Genome sc|0000421

Genomics

Accession

INSDC Nucleotide:JAUCGL000000000

Type

Single-Cell Amplified Genome (SAG)

Estimated Quality Metrics

• Completeness: 98.0%
• Contamination: 0.0%
• Quality: 98.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

204.0 ×

Source

• BioSample: SAMN35709904

Other features

• G+C Content: 34.0%

Submitter comments

The assembly of the genome was carried out using the SPAdes v3.15.1 program. Prokka v1.14.6 program was used for gene annotation (identify tRNA and rRNA genes). Completion and contamination were estimated by the CheckM v.1.2.1 program and MiGA. The completion figure from checkM was 98% (0% contamination), while MiGa project informed 100% (0% contamination). This genome is proposed as type for new species Halobeggiatoa hulotii.

Automated checks

Failed: Cannot find ncbi:nuccore:JAUCGL000000000