Genome sc|0000423

Genomics

Accession

INSDC Nucleotide:JAUCGG000000000

Type

Single-Cell Amplified Genome (SAG)

Estimated Quality Metrics

• Completeness: 91.3%
• Contamination: 0.0%
• Quality: 91.3

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 17 amino acids

Sequencing depth

74.0 ×

Source

• BioSample: SAMN35709909

Other features

• G+C Content: 46.0%

Submitter comments

The assembly of the genome was carried out using the SPAdes v3.15.1 program. Prokka v1.14.6 program was used for gene annotation (identify tRNA and rRNA genes). Completion and contamination were estimated by the CheckM v.1.2.1 program and MiGA. The completion figure from checkM was 90%, while MiGa project informed 91.3% (0% contamination). The completion informed is from MiGA. This genome is proposed as a type for the new species Desulfonema wilhelmii.

Automated checks

Failed: Cannot find ncbi:nuccore:JAUCGG000000000