Genome sc|0000424


Database

INSDC Nucleotide

Accession

JAUCFZ000000000

Genomics

Accession
INSDC Nucleotide:JAUCFZ000000000
Type
Single-Cell Amplified Genome (SAG)
Estimated Quality Metrics
  • Completeness: 91.0%
  • Contamination: 3.0%
  • Quality: 76.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 10 amino acids
Sequencing depth
38.0 ×
Source
Other features
  • G+C Content: 28.0%
Submitter comments
The assembly of the genome was carried out using the SPAdes v3.15.1 program. Prokka v1.14.6 program was used for gene annotation (identify tRNA and rRNA genes). Completion and contamination were estimated by the CheckM v.1.2.1 program and MiGA. The completion figure from checkM was 91% (3%contamination), while MiGa project informed 91% (0% contamination). This genome is proposed as type for new species Filamentium carolae.
Automated checks
Failed: Cannot find ncbi:nuccore:JAUCFZ000000000

Last modified over 1 year ago


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