Genome sc|0000458


Database

NCBI Assembly

Accession

GCF_030412265.1

Genomics

Accession
NCBI Assembly:GCF_030412265.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.92%
  • Contamination: 0.86%
  • Quality: 94.62
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
1437.35 ×
Source
Other features
  • G+C Content: 43.65%
  • Coding Density: 84.2%
  • Codon Table: 11
  • N50: 1,390,346 bp
  • Contigs: 16
  • Largest Contig: 1,557,022 bp
  • Assembly Length: 4,967,627 bp
  • Ambiguous Assembly Fraction: 0.004%
Submitter comments
See full comment
Automated checks
Complete

Last modified 4 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-10-15
Location
Lat Lon: 3.26 S 60.20 W
Toponym
Geo Loc Name: Brazil: Iranduba, Manaus
Environment
Sample Type: pure culture
Isolation Source: rhizosphere
Env Broad Scale: Tropical woodland biome
Env Local Scale: Forest
Env Medium: soil
Other
Depth: 10 cm
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 4 days ago


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