Genome sc|0000468


Database

NCBI Assembly

Accession

GCA_002710215.1

Genomics

Accession
NCBI Assembly:GCA_002710215.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.5%
  • Contamination: 2.9%
  • Quality: 78.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 59.0%)
  • 1 23S rRNA (up to 48.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 57.5%
  • Coding Density: 85.51%
  • Codon Table: 11
  • N50: 52,380 bp
  • Contigs: 76
  • Largest Contig: 169,477 bp
  • Assembly Length: 3,074,704 bp
  • Ambiguous Assembly Fraction: 0.2%
Automated checks
Complete

Last modified 10 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011
Location
Not detected
Toponym
Geo Loc Name: Atlantic Ocean
Environment
Sample Type: metagenomic assembly
Env Biome: marine pelagic biome
Isolation Source: South Atlantic Ocean
Other
Depth: 5-1000m
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 10 months ago


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