SeqCode Registry
cognitis nomina
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Genomes
sc|0000497
JSON
Genome sc|0000497
Database
NCBI Assembly
Accession
GCA_947381805
Genomics
Accession
NCBI Assembly:
GCA_947381805
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.05%
(automated estimate: 100.0%)
Contamination:
1.57%
(automated estimate: 1.9%)
Quality:
90.2
(automated estimate: 90.5)
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 93.1%)
(automated estimate: 2)
1 23S rRNA (up to 74.0%)
tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
SRA: ERR10502792
Other features
G+C Content:
50.47%
(automated estimate: 50.47%)
Coding Density:
89.72%
Codon Table:
11
N50:
738,960 bp
Contigs:
43
Largest Contig:
738,960 bp
Assembly Length:
1,381,484 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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