SeqCode Registry
cognitis nomina
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Genomes
sc|0000517
JSON
Genome sc|0000517
Name
“Glutamicibacter rhizosphaerae”
Database
NCBI Assembly
Accession
VHIN00000000
Genomics
Accession
NCBI Assembly:
VHIN00000000
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.1%
Contamination:
1.9%
Quality:
88.6
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
SRA: SRR19316923
Other features
G+C Content:
55.57%
Coding Density:
88.95%
Codon Table:
11
N50:
558,740 bp
Contigs:
28
Largest Contig:
782,988 bp
Assembly Length:
3,524,842 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
No BioSample metadata was found associated to this genome.
Metadata retrieved
11 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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