SeqCode Registry
cognitis nomina
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Genomes
sc|0000518
JSON
Genome sc|0000518
Name
“Janthinobacterium sediminis”
Database
NCBI Assembly
Accession
JAFLJN000000000
Genomics
Accession
NCBI Assembly:
JAFLJN000000000
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
95.3%
Contamination:
1.9%
Quality:
85.8
Ribosomal and transfer RNA genes
3 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
BioSample: SAMN18118494
Other features
G+C Content:
63.34%
Coding Density:
89.76%
Codon Table:
11
N50:
357,808 bp
Contigs:
89
Largest Contig:
682,003 bp
Assembly Length:
6,185,616 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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