SeqCode Registry
cognitis nomina
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Genomes
sc|0000794
JSON
Genome sc|0000794
Name
“Spongiifermentum lactens”
Database
NCBI Assembly
Accession
GCA_028289815.1
Genomics
Accession
NCBI Assembly:
GCA_028289815.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
90.95%
Contamination:
0.59%
Quality:
88.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 71.0%)
tRNAs for 20 amino acids
Sequencing depth
15.0 ×
Source
BioSample: SAMN30287284
And 3 more…
Other features
G+C Content:
48.82%
Coding Density:
86.84%
Codon Table:
11
N50:
32,420 bp
Contigs:
89
Largest Contig:
120,012 bp
Assembly Length:
2,179,184 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
All sources
×
BioSample: SAMN30287284
BioSample: SAMN13227204
BioSample: SAMN13227205
BioSample: SAMN13227206
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