SeqCode Registry
cognitis nomina
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Genomes
sc|0000817
JSON
Genome sc|0000817
Database
NCBI Assembly
Accession
JAVLSP000000000
Genomics
Accession
NCBI Assembly:
JAVLSP000000000
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
97.13%
Contamination:
0.88%
Quality:
92.73
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 56 amino acids
Sequencing depth
61.0 ×
Source
BioSample: SAMN37218445
Other features
G+C Content:
46.7%
Submitter comments
Completeness and contamination was assessed with GTDB-Tk v2.3.0
rRNAs and tRNAs were recovered with Bakta v1.7.0
Automated checks
Failed: Cannot find ncbi:assembly:JAVLSP000000000
Last modified
over 1 year ago
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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