JSON

Genome sc|0000834

Name

“Mesorubrivivax aquidulcis”

Database

NCBI Assembly

Accession

GCA_022843905.1

Genomics

Accession
NCBI Assembly:GCA_022843905.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.7%
  • Contamination: 2.1%
  • Quality: 88.2
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
226.9 ×
Source
Other features
  • G+C Content: 68.85%
  • Coding Density: 91.28%
  • Codon Table: 11
  • N50: 96,818 bp
  • Contigs: 186
  • Largest Contig: 329,609 bp
  • Assembly Length: 7,434,437 bp
  • Ambiguous Assembly Fraction: 0.02%
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-09
Location
Lat Lon: 42.28 N 83.74 W
Toponym
Geo Loc Name: USA: Ann Arbor, Michigan
Environment
Isolation Source: granular activated carbon biofilter from drinking water treatment plant (DWTP)
Env Broad Scale: Drinking water treatment plant (DWTP)
Env Local Scale: Granular activated carbon
Env Medium: Biofilter
Other
Not detected
Package
Ncbi Submission Package: MIMS.me.microbial.5.0
Biosamplemodel: MIMS.me
All retrieved samples
Metadata retrieved 11 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license