SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0000954
JSON
Genome sc|0000954
Database
INSDC Nucleotide
Accession
JAVKGW000000000
Genomics
Accession
INSDC Nucleotide:
JAVKGW000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
95.3%
(automated estimate: 95.3%)
Contamination:
0.9%
(automated estimate: 0.9%)
Quality:
90.8
(automated estimate: 90.8)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 26.0%)
0 23S rRNAs
tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
BioSample: SAMN35168701
Other features
G+C Content:
69.38%
(automated estimate: 69.38%)
Coding Density:
94.51%
Codon Table:
11
N50:
337,589 bp
Contigs:
18
Largest Contig:
535,243 bp
Assembly Length:
2,490,677 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
Search
×
Names
Publications
Authors
Subjects