JSON

Genome sc|0000971

Database

INSDC Nucleotide

Accession

JAVKII000000000

Genomics

Accession
INSDC Nucleotide:JAVKII000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.59% (automated estimate: 95.3%)
  • Contamination: 1.6% (automated estimate: 2.8%)
  • Quality: 84.59 (automated estimate: 81.3)
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 71.88% (automated estimate: 71.87%)
  • Coding Density: 92.62%
  • Codon Table: 11
  • N50: 58,578 bp
  • Contigs: 79
  • Largest Contig: 298,563 bp
  • Assembly Length: 3,134,448 bp
  • Ambiguous Assembly Fraction: 0.0056%
Automated checks
Complete
Last modified 10 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license