Tantalella remotaTs


Citation

Formal styling
Tantalella remotaTs Williams et al., 2021 (valid 2024)
Effective publication
Williams et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:2rggbgyb (validated)
Canonical URL
https://seqco.de/i:33289

Nomenclature

Rank
Species
Syllabication
re.mo'ta
Etymology
L. fem. adj. remota, remote, distant; referencing the remoteness of the locality.
Nomenclatural type
NCBI Assembly: GCA_030765685.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This species is the nomenclatural type for the genus Tantalella. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Based on genome predictions, this species is heterotrophic and encodes several proteases and peptidases to degrade proteins to amino acids. Additionally, ABC transporters for transport of simple sugars and glycoside hydrolases are encoded by the genome, along with the ability to synthesize trehalose and glycogen. Fermentation of glucose to acetyl-CoA through the EMP pathway is likely. A V-type ATPase and an Rnf complex is encoded for ATP synthesis, and an incomplete horse-shoe type TCA cycle can be reconstructed from the genome. A Group 3b [NiFe] hydrogenase has been reported for this species. All components for a Type-4a pilus and a very large ORF are present in the genome. The nomenclatural type for the species is the genome designated 3300035698_1097.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Tantalella » Tantalella remotaTs
Parent
Tantalella gtdb

Genomics

Accession
NCBI Assembly:GCA_030765685.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.21%
  • Contamination: 1.79%
  • Quality: 89.26
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 8.0%)
  • 1 23S rRNA (up to 11.0%)
  • tRNAs for 20 amino acids
Sequencing depth
15.0 ×
Source
Other features
  • G+C Content: 47.35%
  • Coding Density: 88.68%
  • Codon Table: 11
  • N50: 35,614 bp
  • Contigs: 96
  • Largest Contig: 151,212 bp
  • Assembly Length: 2,025,415 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
IMG Annotation pipeline
CheckM1 from Williams et al 2021,  doi 10.3389/fmicb.2021.741077
CheckM2 from Seymour et al 2023,  doi 10.1038/s41564-022-01319-1  
Automated checks
Complete
See additional details

Last modified 5 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Allen, Michelle about 1 year ago
Submitted by
Allen, Michelle 2 months ago
Curators
Validated by
Palmer, Marike 30 days ago
Date of priority
2024-09-04 06:09 AM (UTC)

Publications
1

Citation Title
Williams et al., 2021, Frontiers in Microbiology Shedding Light on Microbial “Dark Matter”: Insights Into Novel Cloacimonadota and Omnitrophota From an Antarctic Lake
Effective publication



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