Tenderia electrophaga^Ts

Citation

Formal styling

Tenderia electrophaga^Ts Eddie et al., 2016 (valid 2023)

Effective publication

Eddie et al., 2016

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:l8kkuqk0 (validated)

Canonical URL

https://seqco.de/i:368

Nomenclature

Rank

Species

Syllabication

e.lec.tro.pha'ga

Etymology

Gr. neut. n. electron, amber; Gr. verb phago, to eat; N.L. fem. adj. electrophaga, eater of electricity

Nomenclatural type

INSDC Nucleotide: CP013099.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The description is the same as given by Eddie et al., 2016:
Slender rod-shaped bacteria, approximately 1.8 × 0.6 µm, Gram-negative, forms clumps on graphite or gold cathodes poised at 310 mV vs SHE. Autotrophic via the Calvin-Benson-Bassham (CBB) cycle, utilizing extracellular electron donors to generate ATP and reducing equivalents via reverse electron transport. Aerobic or microaerophilic, non-photosynthetic with no evidence of ability to grow chemolithoautotrophically with ammonium or reduced sulfur species as electron donors. Mesophilic growth in artificial seawater. The basis of recognition as a novel candidate genus and species within the Gammaproteobacteria is a phylogenetic position that is not clearly within any known family. The closest species with validly published names are within the orders Chromatiales and Thiotrichales. Cells are recognized with the 16S rRNA specific oligonucleotide probe Tel428 (5′-CGTCATTATCCTCCCTGCTGAA-3′). The DNA G+C content is 59.2 mol%. It grows as a member of a bacterial community enriched from marine sediments and seawater collected in near shore water at the Rutgers University Marine Field Station (Tuckerton, NJ, USA).

Classification

Bacteria » Pseudomonadota » Gammaproteobacteria » Tenderiales » Tenderiaceae » Tenderia » Tenderia electrophaga^Ts

Parent

Tenderia gtdb

Genomics

Accession

INSDC Nucleotide:CP013099.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.63%
• Contamination: 2.05%
• Quality: 89.38

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

400.0 ×

Source

• BioSample: SAMN04120379

Other features

• G+C Content: 59.19%
• Coding Density: 90.15%
• Codon Table: 11
• N50: 3,656,958 bp
• Contigs: 1
• Largest Contig: 3,656,958 bp
• Assembly Length: 3,656,958 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Completeness and contamination estimates with CheckM.

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Tree: s__Tenderia electrophaga
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Tenderia electrophaga (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 7 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Eddie, Brian over 2 years ago

Submitted by

Chuvochina, Maria over 1 year ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike

Endorsed by

Palmer, Marike over 1 year ago

Validated by

Palmer, Marike over 1 year ago

Date of priority

2023-08-22 03:47 AM (UTC)