SeqCode Registry
Register List https://seqco.de/r:-kiq_w89 [2024]

Register list for 16 new names including Andeanibacterium gen. nov.

Submitted by Díaz-García, Laura

Table 1: Complete list of names proposed in the current register list.

Proposed Taxon Etymology Description Parent Taxon Type Registry URL
Genus Andeanibacterium [An.de.a.ni.bac.te'ri.um] N.L. masc. adj. andeanus, pertaining to the Andes; N.L. neut. n. bacterium, small rod; N.L. neut. n. Andeanibacterium, Andean rod
A genus established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction, and phylogenomic analyses and is classified as a member of the Sphingomonadaceae family. Genomic metrics include ANI (79.88), AAI (61.59) and dDDH d4 (20.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 54 CAZymes, 15 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
Sphingomonadaceae Andeanibacterium colombienseTs seqco.de/i:24097
Species Microbacterium colombiense [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1911. Genomic metrics include ANI (85.9), AAI (81.1) and dDDH d4 (28.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 82 CAZymes, 30 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Microbacterium INSDC Nucleotide: CP119308.1 Ts seqco.de/i:24100
Species Pseudomonas colombiensis [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_425. Genomic metrics include ANI (86.68), AAI (86.03) and dDDH d4 (29.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 103 CAZymes, 19 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolisis were found within the MAG.
Pseudomonas INSDC Nucleotide: CP119322.1 Ts seqco.de/i:24106
Species Sphingomonas colombiensis [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_27. Genomic metrics include ANI (85.46), AAI (66.97) and dDDH d4 (20.8). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 59 CAZymes, 10 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
Sphingomonas INSDC Nucleotide: CP119315.1 Ts seqco.de/i:24102
Species Sphingomonas phytovorans [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_3606. Genomic metrics include ANI (80.99), AAI (80.97) and dDDH d4 (22.2). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 95 CAZymes, 29 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Sphingomonas INSDC Nucleotide: CP119314.1 Ts seqco.de/i:24103
Species Microbacterium phytovorans [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. neut. part. adj. phytovorans, plant-devouring
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_4610. Genomic metrics include ANI (82.28), AAI (73.07) and dDDH d4 (21.5). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 74 CAZymes, 31 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Microbacterium INSDC Nucleotide: CP119321.1 Ts seqco.de/i:24107
Species Pseudomonas phytovorans [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
A genus established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_876. Genomic metrics include ANI (92.18), AAI (95) and dDDH d4 (47). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 87 CAZymes, 16 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolysis were found within the MAG.
Pseudomonas INSDC Nucleotide: CP119325.1 Ts seqco.de/i:24109
Species Pedobacter colombiensis [co.lom.bi.en'sis] N.L. masc. adj. colombiensis, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_3858. Genomic metrics include ANI (81.7), AAI (81.02) and dDDH d4 (29.6). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 254 CAZymes, 63 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Pedobacter INSDC Nucleotide: CP119313.1 Ts seqco.de/i:24104
Species Kaistia colombiensis [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_2176. Genomic metrics include ANI (86.41), AAI (77.29) and dDDH d4 (28.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 95 CAZymes, 18 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Kaistia INSDC Nucleotide: CP119318.1 Ts seqco.de/i:24101
Species Chryseobacterium colombiense [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1654. Genomic metrics include ANI (88.96), AAI (95) and dDDH d4 (36.2). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 139 CAZymes, 41 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolisis were found within the MAG.
Chryseobacterium INSDC Nucleotide: CP119310.1 Ts seqco.de/i:24098
Species Andeanibacterium colombienseTs [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction, and phylogenomic analyses and is classified as a member of the Sphingomonadaceae family. The type species of the genus is Andeanibacterium colombiense. Genomic metrics include ANI (79.88), AAI (61.59) and dDDH d4 (20.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 54 CAZymes, 15 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
Andeanibacterium INSDC Nucleotide: CP119316.1 Ts seqco.de/i:31306
Species Pseudobacter hemicellulosilyticus [he.mi.cel.lu.lo.si.ly'ti.cus] N.L. neut. n. hemicellulosum, hemicellulose; N.L. masc. adj. lyticus, able to dissolve; N.L. masc. adj. hemicellulosilyticus, hemicellulose dissolving
The species is established on the basis of MiGA taxonomic novelty analysis, the taxonomic placement using maximum likelihood trees with 120 bacterial marker genes (bac120) and and the type material is the genome MAG_7. Genomic metrics include ANI (69.21), AAI (65.96) and dDDH d4 (22.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 237 CAZymes, 99 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Pseudobacter INSDC Nucleotide: CP119311.1 Ts seqco.de/i:24095
Species Devosia phytovorans [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_4196. Genomic metrics include ANI (84.84), AAI (74.37) and dDDH d4 (23.5). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 90 CAZymes, 17 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Devosia INSDC Nucleotide: CP119312.1 Ts seqco.de/i:24105
Species Brevundimonas colombiensis [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_833. Genomic metrics include ANI (87.3), AAI (82.62) and dDDH d4 (29.7). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 73 CAZymes, 13 of them involved in lignocellulose degradation. In addition, putative genes for protocatechuate and phtalate catabolism were found within the MAG.
Brevundimonas INSDC Nucleotide: CP119326.1 Ts seqco.de/i:24108
Species Cohnella colombiensis [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
The species is established on the basis of MiGA taxonomic novelty analysis, the taxonmic placement using maximum likelihood trees with 120 bacterial marker genes (bac120) and and the type material is the genome MAG_2441. Genomic metrics include ANI (67.06), AAI (67.21) and dDDH d4 (30.4). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 149 CAZymes, 44 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
Cohnella INSDC Nucleotide: CP119317.1 Ts seqco.de/i:24096
Species Brevundimonas phytovorans [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1865. Genomic metrics include ANI (91.28), AAI (87.92) and dDDH d4 (40.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 39 CAZymes, 6 of them involved in lignocellulose degradation. In addition, putative genes for protocatechuate and phtalate catabolism were found within the MAG.
Brevundimonas INSDC Nucleotide: CP119309.1 Ts seqco.de/i:24099