Table 1: Complete list of names proposed in the current register list.
| Proposed Taxon | Etymology | Description | Parent Taxon | Type | Registry URL |
|---|---|---|---|---|---|
| Genus Pseudoplanktomarina | [Pseu.do.plank.to.ma.ri'na] Gr. neut. adj. pseudes, false; N.L. fem. n. Planktomarina, a marine bacterial genus; N.L. fem. n. Pseudoplanktomarina, the false Planktomarina | Members of Candidatus Pseudoplanktomarina genus are aerobic heterotrophic bacteria with an average genomes size 2.41 Mbp (raw: 2.17 Mbp) and a GC content of 0.43. Currently, there are three distinct species exhibiting different distribution patterns across the global ocean. All species in this group contain a proteorhodopsin gene, however, lack genes for sox and CODH clusters. Entner-Doudoroff and pentose phosphate pathways are two major pathways for glycolysis catabolism in Candidatus Pseudoplanktomarina. Additionally, genes involved in DMSP and DHPS degradation are also present in this genus. The type species of the genus Pseudoplanktomarina is Pseudoplanktomarina karensis.
|
Paracoccaceae | Pseudoplanktomarina karensisTs | seqco.de/i:24061 |
| Species Pseudoplanktomarina karensisTs | [kar.en'sis] N.L. fem. adj. karensis, pertaining to the Kara Sea, corresponding to the origin from where the genome was recovered (Kara Sea) | The type material, GCA_951541495.1 (MAG B2-20), is a metagenome-assembled genome from a sample taken at the epipelagic zone in the Kara Sea, Arctic Ocean (Biosample accession: SAMEA4397239). The assembly genome is of high quality with 95.6 % completeness with 0.02 % contamination and the genome contains 16 tRNA genes. The genome size is 2.28 (raw: 2.18) with a GC content of 0.44. Pseudoplanktomarina karensis is the type species of the new genus Pseudoplanktomarina.
|
Pseudoplanktomarina | NCBI Assembly: GCA_951541495.1 Ts | seqco.de/i:24063 |
| Species Planktomarina antarctica | [ant.arc'ti.ca] L. fem. adj. antarctica, of the Antarctic, corresponding to the origin from where the genome was recovered (Antarctic ocean) | The type material, GCA_029962705.1 (MAG C5-3), is a metagenome-assembled genome from a sample taken at the epipelagic zone in the Southern Ocean in 2012 (Biosample accession: SAMEA5958381). The assembly genome is of high quality with 94.16% completeness and 1.77 % contamination and contains 16 tRNA genes. The genome size is 2.80 Mbp (raw: 2.68 Mbp) with a GC content of 0.48.
|
Planktomarina | NCBI Assembly: GCA_029962705.1 Ts | seqco.de/i:24060 |
| Species Planktomarina arctica | [arc'ti.ca] L. fem. adj. arctica, northern, from the Arctic, corresponding to the origin from where the genome was recovered (Arctic ocean) | The type material, GCA_951542345.1 (MAG C4-4), is a metagenome-assembled genome from a sample taken at the epipelagic zone in the Arctic Ocean in 2013 (Biosample accession: SAMEA4397426). The completeness and contamination of the assembly are 93.42% and 0.41%, respectively. Genome assembly contains 14 tRNA genes. The genome size is 2.64 (raw: 2.47 Mbp) with a GC content of 0.48.
|
Planktomarina | NCBI Assembly: GCA_951542345.1 Ts | seqco.de/i:24058 |
| Species Planktomarina forsetii | [for.set'i.i] N.L. gen. n. forsetii, of Forseti, Scandinavian god of justice and reconciliation resident on Helgoland, from where the genome was recovered. | The type material, GCA_951543265.1 (MAG C3-11), is a metagenome-assembled genome derived from a water sample (Biosample: SAMEA5407188). The assembly is of high quality with a mean completeness of 96.74% and 0.1% contamination and contains 19 tRNAs. The genome size is 3.12 Mbp (raw: 3.02 Mbp) with a GC content of 0.51.
|
Planktomarina | NCBI Assembly: GCA_951543265.1 Ts | seqco.de/i:24046 |