SeqCode Registry
Register List https://seqco.de/r:sfdglxu8 [2024]

Register list for 31 new names from Prabhu et al. 2024

Submitted by Chuvochina, Maria

Order Australimonadales

Etymology
[Aus.tra.li.mo.na.da'les] N.L. fem. n. Australimonas, type genus of the order; -ales, ending to denote an order; N.L. fem. pl. n. Australimonadales, the Australimonas order
Nomenclatural type
Genus Australimonas
Description
The description of Australimonadales is the same as that of Australimonas. The former name for this order is UBA2963.
Classification
Bacteria » Chloroflexota » Dehalococcoidia » Australimonadales
References
Effective publication: Prabhu et al., 2024 [1]

Order Eutrophobiales

Etymology
[Eu.tro.pho.bi.a'les] N.L. masc. n. Eutrophobius, type genus of the order; -ales, ending to denote an order; N.L. fem. pl. n. Eutrophobiales, the Eutrophobius order
Nomenclatural type
Genus Eutrophobius
Description
The description of Eutrophobiales is the same as that of Eutrophobius. The former name for this order is UBA4486.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Eutrophobiales
References
Effective publication: Prabhu et al., 2024 [1]

Family Australimonadaceae

Etymology
[Aus.tra.li.mo.na.da.ce'ae] N.L. fem. n. Australimonas, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Australimonadaceae, the Australimonas family
Nomenclatural type
Genus Australimonas
Description
The description of Australimonadaceae is the same as for Australimonas. The former name for this family is UBA2963.
Classification
Bacteria » Chloroflexota » Dehalococcoidia » Australimonadales » Australimonadaceae
References
Effective publication: Prabhu et al., 2024 [1]

Family Marisalimonadaceae

Etymology
[Ma.ri.sa.li.mo.na.da.ce'ae] N.L. fem. n. Marisalimonas, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Marisalimonadaceae, the Marisalimonas family
Nomenclatural type
Genus Marisalimonas
Description
The description of Marisalimonadaceae is the same as for Marisalimonas. The former name for this family is AAA536-G10.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Puniceispirillales » Marisalimonadaceae
References
Effective publication: Prabhu et al., 2024 [1]

Family Salivitaceae

Etymology
[Sa.li.vi.ta.ce'ae] N.L. fem. n. Salivita, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Salivitaceae, the Salivita family
Nomenclatural type
Genus Salivita
Description
The description of Salivitaceae is the same as that of Salivita. The former name for this family is HTCC2089.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Salivitaceae
References
Effective publication: Prabhu et al., 2024 [1]

Family Eutrophomonadaceae

Etymology
[Eu.tro.pho.mo.na.da.ce'ae] N.L. fem. n. Eutrophomonas, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Eutrophomonadaceae, the Eutrophomonas family
Nomenclatural type
Genus Eutrophomonas
Description
The description of Eutrophomonadaceae is the same as that of Eutrophomonas. The former name for this family is UBA3031.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophomonadaceae
References
Effective publication: Prabhu et al., 2024 [1]

Family Eutrophobiaceae

Etymology
[Eu.tro.pho.bi.a.ce'ae] N.L. masc. n. Eutrophobius, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Eutrophobiaceae, the Eutrophobius family
Nomenclatural type
Genus Eutrophobius
Description
The description of Eutrophobiaceae is same as that of Eutrophobius. The former name for this family is UBA4486.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Eutrophobiales » Eutrophobiaceae
References
Effective publication: Prabhu et al., 2024 [1]

Family Eutrophovitaceae

Etymology
[Eu.tro.pho.vi.ta.ce'ae] N.L. fem. n. Eutrophovita, type genus of the family; -aceae, ending to denote a family; N.L. fem. pl. n. Eutrophovitaceae, the Eutrophovita family
Nomenclatural type
Genus Eutrophovita
Description
The description of Eutrophovitaceae is same as that of Eutrophovita. The former name for this family is UBA3031.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophovitaceae
References
Effective publication: Prabhu et al., 2024 [1]

Genus Australimonas

Etymology
[Aus.tra.li.mo'nas] L. adj. australis, southern; N.L. fem. n. monas, a unit; N.L. fem. n. Australimonas, a unit from the south, referring to Australia where the organism was found
Nomenclatural type
Species Australimonas brisbanensisTs
Description
The description is identical to that of the type species.
Classification
Bacteria » Chloroflexota » Dehalococcoidia » Australimonadales » Australimonadaceae » Australimonas
References
Effective publication: Prabhu et al., 2024 [1]

Genus Marisalimonas

Etymology
[Ma.ri.sa.li.mo'nas] L. neut. n. mare, the sea; L. masc. n. sal, salt; N.L. fem. n. monas, a unit; N.L. fem. n. Marisalimonas, a microbe occurring in saline conditions in the sea
Nomenclatural type
Species Marisalimonas marinaTs
Description
The former name for this genus is AAA536-G10. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Puniceispirillales » Marisalimonadaceae » Marisalimonas
References
Effective publication: Prabhu et al., 2024 [1]

Genus Salsuginivita

Etymology
[Sal.su.gi.ni.vi'ta] L. fem. n. salsugo, brackish water; L. fem. n. vita, life; N.L. fem. n. Salsuginivita, a bacterium found in brackish habitats
Nomenclatural type
Species Salsuginivita brisbanensisTs
Description
The former name for this genus is CAIYFD01. The description is identical to that of the type species.
Classification
Bacteria » Verrucomicrobiota » Opitutia » Opitutales » Opitutaceae » Salsuginivita
References
Effective publication: Prabhu et al., 2024 [1]

Genus Salivita

Etymology
[Sa.li.vi'ta] L. masc. n. sal, salt; L. fem. n. vita, life; N.L. fem. n. Salivita, an organism associated with saltwater
Nomenclatural type
Species Salivita marinaTs
Description
The former name for this genus is RGAU01. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Salivitaceae » Salivita
References
Effective publication: Prabhu et al., 2024 [1]

Genus Eutrophobius

Etymology
[Eu.tro.pho.bi'us] Gr. adv. , good; Gr. adj. trophos, feeder; Gr. masc. n. bios, life; N.L. masc. n. Eutrophobius, life associated with eutrophic environments
Nomenclatural type
Species Eutrophobius brisbanensisTs
Description
This is a novel group of the family and order UBA4486. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Eutrophobiales » Eutrophobiaceae » Eutrophobius
References
Effective publication: Prabhu et al., 2024 [1]

Genus Eutrophocola

Etymology
[Eu.tro.pho.co'la] Gr. adv. , good; Gr. adj. trophos, feeder; L. masc. / fem. suff. cola, inhabitant; N.L. fem. n. Eutrophocola, referring to a microbe in eutrophic aquatic environments
Nomenclatural type
Species Eutrophocola salsuginisTs
Description
The former name for this genus is RFVC01. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Pseudohongiellaceae » Eutrophocola
References
Effective publication: Prabhu et al., 2024 [1]

Genus Eutrophomonas

Etymology
[Eu.tro.pho.mo'nas] Gr. adv. , good; Gr. adj. trophos, feeder; L. fem. n. monas, a unit; N.L. fem. n. Eutrophomonas, a unit associated with eutrophic environments
Nomenclatural type
Species Eutrophomonas brisbanensisTs
Description
This is a novel group of the family UBA3031 within order Burkholderiales. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophomonadaceae » Eutrophomonas
References
Effective publication: Prabhu et al., 2024 [1]

Genus Eutrophosalina

Etymology
[Eu.tro.pho.sa.li'na] Gr. adj. , good; Gr. adj. trophos, feeder; N.L. fem. adj. salina, salty; N.L. fem. n. Eutrophosalina, a microbe adapted to eutrophic and saline environments
Nomenclatural type
Species Eutrophosalina marinaTs
Description
The former name for this genus is MED-G14. The description is identical to that of the type species.
Classification
Bacteria » Bacteroidota » Flavobacteriia » Flavobacteriales » Flavobacteriaceae » Eutrophosalina
References
Effective publication: Prabhu et al., 2024 [1]

Genus Eutrophovita

Etymology
[Eu.tro.pho.vi'ta] Gr. adv. , good; Gr. masc. / fem. adj. trophos, feeder; L. fem. n. vita, life; N.L. fem. n. Eutrophovita, an organism associated with eutrophic environments
Nomenclatural type
Species Eutrophovita brisbanensisTs
Description
This is a novel group of the family UBA3031 within order Burkholderiales. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophovitaceae » Eutrophovita
References
Effective publication: Prabhu et al., 2024 [1]

Genus Salinivivens

Etymology
[Sa.li.ni.vi'vens] N.L. masc. adj. salinus, saline; L. part. adj. vivens, living; N.L. masc. n. Salinivivens, a microbial organism thriving in saline conditions
Nomenclatural type
Species Salinivivens marinusTs
Description
The former name for this genus is MED-G52. The description is identical to that of the type species.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Rhodobacterales » Paracoccaceae » Salinivivens
References
Effective publication: Prabhu et al., 2024 [1]

Species Marisalimonas marinaTs

Etymology
[ma.ri'na] L. fem. adj. marina, of the sea, marine
Nomenclatural type
NCBI Assembly: GCA_038131365.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Pectin, Mucin and Starch) as well as fix inorganic carbon via the Calvin cyle (rbcLS). Capable of nitrate (NRT2), sulphate (ssu) and phosphorus uptake (pst, pho) and regulation, as well as osmoregulate via multiple genes (trkA, nqrF, mnh, proXV). Could have possible motility using motAB and fliGMN genes. Based on the genome reporting standards for MAGs, the estimated completeness 91.69%, contamination 0.14%, and the presence of the 5S (109 bp), 16S (1,482 bp), and 23S (2,712 bp) rRNA gene and 32 tRNAs. Type genome is defined as “high-quality” draft MAG, with six contigs, genome size of 1.9Mbps.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Puniceispirillales » Marisalimonadaceae » Marisalimonas » Marisalimonas marinaTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Australimonas brisbanensisTs

Etymology
[bris.ban.en'sis] N.L. fem. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038147155.1 Ts
Description
This is a novel group of the order and family UBA2963. Inferred to degrade Mucin, and carry genes for phosphate and phosphonate transporters. Can perform osmoregulation using trkA (K+ transporter) and multicomponent Na+/H+ transportation (mnh). Based on the genome reporting standards for MAGs, the estimated completeness was 98.68%, contamination 0%, and the presence of the 16S (1,472 bp), and 23S (2,898 bp) rRNA gene and 46 tRNAs. Type genome is defined as “high-quality” draft MAG, and a genome size of 1.9Mbps.
Classification
Bacteria » Chloroflexota » Dehalococcoidia » Australimonadales » Australimonadaceae » Australimonas » Australimonas brisbanensisTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Eutrophosalina marinaTs

Etymology
[ma.ri'na] L. fem. adj. marina, of the sea, marine
Nomenclatural type
NCBI Assembly: GCA_038147175.1 Ts
Description
Inferred to be marine ecotype, and can break down a wide range of organic carbon substrates (Chitin, Pectin, Mucin, Cellulose, Sulfated polysaccharides and Starch). Also carries a polyphosphate kinase gene for polyphosphate accumulation, likely fuelling cytochrome c oxidase (coxABCD). Can perform osmoregulation using trk1 (K+ transporter) and nqrF (Na+ transporter). Based on the genome reporting standards for MAGs, the estimated completeness was 96.32%, contamination 0%, and the presence of the 16S (1,522 bp), and 23S (2,775 bp) rRNA gene and 34 tRNAs. Type genome is defined as “high-quality” draft MAG, having two contigs and a genome size of 1.5Mbps.
Classification
Bacteria » Bacteroidota » Flavobacteriia » Flavobacteriales » Flavobacteriaceae » Eutrophosalina » Eutrophosalina marinaTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Salivita marinaTs

Etymology
[ma.ri'na] L. fem. adj. marina, of the sea, marine
Nomenclatural type
NCBI Assembly: GCA_038144425.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Mucin, Xylan, Cellulose and Starch) as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Encodes genes for nitrate uptake (NRT2), thiosulfate oxidation (soxABCDXYZ), sulphate assimilation (cys), phosphorus uptake and regulation (pho, pst), polyphosphate kinase and phosphatase (ppa). Can perform osmoregulation (trkA, nqrF, nhaC) and is possibly motile (fliGMN, motAB). Based on the genome reporting standards for MAGs , the estimated completeness was 91.02%, contamination 1.36%, and the presence of the 5S (110bp), 16S (1,532 bp), and 23S (2,880 bp) rRNA gene and 42 tRNAs. Type genome is defined as “high-quality” draft MAG, with genome size of 3.3Mbps.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Salivitaceae » Salivita » Salivita marinaTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Eutrophovita brisbanensisTs

Etymology
[bris.ba.nen'sis] N.L. fem. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038147395.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Pectin, Cellulose and Starch) as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Encodes genes for urea uptake and degradation (ureABC, urtABCDE), phosphorus uptake and regulation (pho, pst), polyphosphate kinase (ppk1), pyrroquinoline quinone (pqqC), thiosulfate oxidation (sox) and sulphate assimilation (cys). Based on the genome reporting standards for MAGs , the estimated completeness 92.77%, contamination 0.61%, and the presence of the 16S (1,532 bp), and 23S (2,933 bp) rRNA gene and 37 tRNAs. Type genome is defined as “high-quality” draft MAG,with genome size of 2.1 Mbps.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophovitaceae » Eutrophovita » Eutrophovita brisbanensisTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Eutrophocola salsuginisTs

Etymology
[sal.su'gi.nis] L. gen. n. salsuginis, of the brackish water
Nomenclatural type
NCBI Assembly: GCA_038147195.1 Ts
Description
Inferred to break down a Chitin and Pectin, as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Carries genes for nitrate uptake (NRT2) and anaerobic dissimilatory nitrate reduction (nirBD). Capable of sulfate assimilation (cys), phosphorus uptake and regulation (pho, pst) and polyphosphate accumulation (ppk1). Likely performing osmoregulation using trk1 (K+ transporter) and proXV (Glycine betaine) and inferred to be motile (fliGMN, motAB gene). Based on the genome reporting standards for MAGs , the estimated completeness was 93.58%, contamination 1.79%, and the presence of the 5S (106bp), 16S (1,551 bp), and 23S (2,877 bp) rRNA gene and 42 tRNAs. Type genome is defined as “high-quality” draft MAG,with genome size of 3Mbps.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Pseudohongiellaceae » Eutrophocola » Eutrophocola salsuginisTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Salsuginivita brisbanensisTs

Etymology
[bris.ban.en'sis] N.L. fem. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038144975.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Pectin, Mucin, Starch) as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Capable of nitrate uptake (NRT2), phosphorus uptake and regulation (pho, pst), polyphosphate accumulation (ppk1) and noted absence of osmoregulation genes. Based on the genome reporting standards for MAGs , the estimated completeness was 98.63%, contamination 0%, and the presence of the 16S (1,555 bp), and 23S (2, 882bp) rRNA gene and 46 tRNAs. Type genome is defined as “high-quality” draft MAG,with genome size of 2.5Mbps.
Classification
Bacteria » Verrucomicrobiota » Opitutia » Opitutales » Opitutaceae » Salsuginivita » Salsuginivita brisbanensisTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Salinivivens marinusTs

Etymology
[ma.ri'nus] L. masc. adj. marinus, of the sea
Nomenclatural type
NCBI Assembly: GCA_038142605.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Pectin, Cellulose and Starch). Capable of performing aerobic anoxygenic photosynthesis (pufLM), and thiosulfate oxidation (soxABCDXYZ), likely performing osmoregulation using trk1 (K+ transporter) and proXV (Glycine betaine) and inferred to be motile (fliGMN, motAB gene). Also carries genes for phosphorus uptake and regulation(pho, pst). Based on the genome reporting standards for MAGs , the estimated completeness 94.41%, contamination 0.3%, and the presence of the 5S (108 bp), 16S (1,457 bp), and 23S (2, 718bp) rRNA gene and 32 tRNAs. Type genome is defined as “high-quality” draft MAG, with genome size of 2.6 Mbps
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Rhodobacterales » Paracoccaceae » Salinivivens » Salinivivens marinusTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Eutrophomonas brisbanensisTs

Etymology
[bris.ban.en'sis] N.L. fem. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038141705.1 Ts
Description
Inferred to break down a wide range of organic carbon substrates (Chitin, Pectin, Cellulose and Starch) as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Encodes genes for urea uptake and degradation (ureABC, urtABCDE), phosphorus uptake and regulation (pho, pst), pyrroquinoline quinone (pqqC), nitrate uptake (NRT2), thiosulfate oxidation (sox) and sulphate assimilation (cys). There is noted absence of osmoregulation genes. Based on the genome reporting standards for MAGs , the estimated completeness 98.78%, contamination 0%, and the presence of the 16S (1,532 bp), and 23S (2, 933 bp) rRNA gene and 40 tRNAs. Type genome is defined as “high-quality” draft MAG, with one contig and genome size of 2.1 Mbps.
Classification
Bacteria » Pseudomonadota » Betaproteobacteria » Burkholderiales » Eutrophomonadaceae » Eutrophomonas » Eutrophomonas brisbanensisTs
References
Effective publication: Prabhu et al., 2024 [1]

Species Nitrosopumilus brisbanensis

Etymology
[bris.ban.en'sis] N.L. masc. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038152885.1 Ts
Description
Based on the genome reporting standards for MAGs, the estimated completeness was 98.63%, contamination 0%, and the presence of the %S (111 bp), 16S (1,464 bp), and 23S (3,117 bp) rRNA gene and 43 tRNAs. Type genome is defined as “high-quality” draft MAG,with genome size of 1.3Mbps
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosopumilus » Nitrosopumilus brisbanensis
References
Effective publication: Prabhu et al., 2024 [1]

Species Eutrophobius brisbanensisTs

Etymology
[bris.ban.en'sis] N.L. masc. adj. brisbanensis, of or belonging to Brisbane
Nomenclatural type
NCBI Assembly: GCA_038131795.1 Ts
Description
Inferred to break down a Chitin and Cellulose as well as carries genes for rTCA cycle to fix inorganic carbon (korABCD). Likely performing sulfate assimilation (cys), polyphosphate accumulation (ppk1) and osmoregulation (trkA, nqrF, mnh). Based on the genome reporting standards for MAGs , the estimated completeness was 98.24%, contamination 0.88%, and the presence of the 5S (110bp), 16S (1.540 bp), and 23S (2,877 bp) rRNA gene and 46 tRNAs. Type genome is defined as “high-quality” draft MAG,with genome size of 2.7Mbps.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Eutrophobiales » Eutrophobiaceae » Eutrophobius » Eutrophobius brisbanensisTs
References
Effective publication: Prabhu et al., 2024 [1]

References

  1. Prabhu et al. (2024). Machine learning and metagenomics identifies uncharacterized taxa inferred to drive biogeochemical cycles in a subtropical hypereutrophic estuary. ISME Communications. DOI:10.1093/ismeco/ycae067

Register List Certificate of Validation

On behalf of the Committee on the Systematics of Prokaryotes Described from Sequence Data (SeqCode Committee), we hereby certify that the Register List seqco.de/r:sfdglxu8 submitted by Chuvochina, Maria and including 29 new names has been successfully validated.


Date of Priority: 2024-08-12 01:22 UTC
DOI: 10.57973/seqcode.r:sfdglxu8