Strain sc|0018267

StrainInfo: SI-ID 9749 ^T

Taxon

Phocaeicola vulgatus (not Bacteroides vulgatus)

Sample

Human, faeces

Cultures (18)

LMG 17767 = ATCC 8482 = CCUG 4940 = DSM 1447 = LMG 7956 = NCTC 11154 = CIP 103714 = JCM 5826 = CCRC 12903 = IFO 14291 = NBIMCC 3541 = NBRC 14291 = BCRC 12903 = CCT 2955 = IAM 14520 = CDBB 1092 = ACM 3158 = VTT E-001734

Other Designations (2)

8482 = LRA 049 07 85

Sequences (20)

• rRNA Operon Nucleotide:AJ867050
  Bacteroides vulgatus 16S rRNA gene, strain ATCC 8482
• Gene Nucleotide:AJ279041
  Bacteroides vulgatus partial gyrA gene for DNA gyrase subunit A, strain ATCC 8482
• rRNA Operon Nucleotide:AY155596
  Bacteroides vulgatus 23S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF176693
  Bacteroides vulgatus 16S-23S rDNA intergenic spacer region
• Gene Nucleotide:AB196161
  Bacteroides vulgatus leuB gene for beta-isopropylmalate dehydrogenase, partial cds, strain:ATCC 8482
• Genome Assembly:GCA_000012825
  Phocaeicola vulgatus ATCC 8482
• Gene Nucleotide:AY338189
  Bacteroides vulgatus strain ATCC 8482 RpoB (rpoB) gene, partial cds
• Gene Nucleotide:AF440238
  Bacteroides vulgatus CPN60 (cpn60) gene, partial cds
• Genome Assembly:GCA_028538915
  Phocaeicola vulgatus ATCC 8482
• rRNA Operon Nucleotide:HQ012024
  Bacteroides vulgatus strain DSM 1447 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY652743
  Bacteroides vulgatus RNA polymerase beta subunit (rpoB) gene, partial cds
• rRNA Operon Nucleotide:AB510712
  Bacteroides vulgatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 5826
• Gene Nucleotide:AB619971
  Bacteroides vulgatus recA gene for recombinase A, partial cds, strain: JCM 5826
• Gene Nucleotide:AB619933
  Bacteroides vulgatus gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM 5826
• rRNA Operon Nucleotide:AB050111
  Bacteroides vulgatus gene for 16S rRNA, partial sequence
• Gene Nucleotide:AB620009
  Bacteroides vulgatus rpoB gene for RNA polymerase beta subunit, partial cds, strain: JCM 5826
• Gene Nucleotide:AB619895
  Bacteroides vulgatus dnaJ gene for chaperone protein dnaJ, partial cds, strain: JCM 5826
• Gene Nucleotide:AB510694
  Bacteroides vulgatus hsp60 gene for heat shock protein 60, partial cds, strain: JCM 5826
• Gene Nucleotide:AB015029
  Bacteroides vulgatus gyrB gene for DNA gyrase subunit B, partial cds, strain:IFO 14291
• rRNA Operon Nucleotide:EU136687
  Bacteroides vulgatus strain BCRC12903 16S ribosomal RNA gene, partial sequence

Associated Publications (10)

• DOI: 10.1016/j.jsb.2011.08.007
  Kumar V, Sivaraman J (2011). Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus.
• DOI: 10.1002/jobm.201300311
  Peixoto RJ, Miranda KR, Ferreira EO, de Paula GR, Rocha ER, Lobo LA, Domingues RM (2013). Production of AI-2 is mediated by the S-ribosylhomocystein lyase gene luxS in Bacteroides fragilis and Bacteroides vulgatus.
• DOI: 10.1016/j.anaerobe.2016.03.012
  Li J, Mandal G, Rosen BP (2016). Expression of arsenic resistance genes in the obligate anaerobe Bacteroides vulgatus ATCC 8482, a gut microbiome bacterium.
• DOI: 10.1093/gbe/evw070
  Lange A, Beier S, Steimle A, Autenrieth IB, Huson DH, Frick JS (2016). Extensive Mobilome-Driven Genome Diversification in Mouse Gut-Associated Bacteroides vulgatus mpk.
• DOI: 10.1002/mbo3.479
  Rocha ER, Krykunivsky AS (2017). Anaerobic utilization of Fe(III)-xenosiderophores among Bacteroides species and the distinct assimilation of Fe(III)-ferrichrome by Bacteroides fragilis within the genus.
• DOI: 10.1016/j.anaerobe.2017.06.002
  O Cuiv P, de Wouters T, Giri R, Mondot S, Smith WJ, Blottiere HM, Begun J, Morrison M (2017). The gut bacterium and pathobiont Bacteroides vulgatus activates NF-kappaB in a human gut epithelial cell line in a strain and growth phase dependent manner.
• DOI: 10.1128/mBio.02289-17
  Jacobson AN, Choudhury BP, Fischbach MA (2018). The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron.
• DOI: 10.1016/j.bone.2020.115710
  Yuan S, Shen J (2020). Bacteroides vulgatus diminishes colonic microbiota dysbiosis ameliorating lumbar bone loss in ovariectomized mice.
• DOI: 10.3748/wjg.v27.i19.2394
  Liu X, Cheng YW, Shao L, Sun SH, Wu J, Song QH, Zou HS, Ling ZX (2021). Gut microbiota dysbiosis in Chinese children with type 1 diabetes mellitus: An observational study.
• DOI: 10.3168/jds.S0022-0302(94)76965-4
  Kaneko T, Mori H, Iwata M, Meguro S (1994). Growth stimulator for bifidobacteria produced by Propionibacterium freudenreichii and several intestinal bacteria.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID9749.3

Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:18267

Local history

• Registered 8 months ago
• Last modified about 1 month ago