Strain sc|0019069

StrainInfo: SI-ID 388 ^T

Taxon

Aeromonas salmonicida subsp. salmonicida (not Aeromonas salmonicida)

Sample

Atlantic salmon kill (GB)

Cultures (18)

LMG 3780 = ATCC 33658 = DSM 3241 = IMET 11051 = NCMB 1102 = CIP 103209 = JCM 7874 = NCIMB 1102 = CECT 894 = CCRC 13016 = CCRC 14163 = NCTC 12959 = CCM 7246 = BCRC 13016 = BCRC 14163 = HAMBI 1984 = KCTC 12266 = DSM 19634

Other Designations (10)

CAIM 346 = CCEB 706 = LMG3780T QC 6/04 = Smith 20 = I.W. Smith 20 = Public Health Laboratory Carmarthen 19291 = 19291 = CAIM 674 = LMG 3780T QC 6/00 = Public Hlth. Lab. Carmarthen 19291

Sequences (70)

• Gene Nucleotide:FJ178249
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 toxic extracellular endopeptidase (asaP1) pseudogene, partial sequence
• Gene Nucleotide:FJ178193
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 beta galactosidase (lacZ) pseudogene, partial sequence
• Gene Nucleotide:U68075
  Aeromonas salmonicida coded portion of proteolysis tag tmRNA gene
• rRNA Operon Nucleotide:EF373989
  Aeromonas salmonicida clone 2 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence
• Gene Nucleotide:AY227051
  Aeromonas salmonicida ATCC 33658 class B beta-lactamase (cphA5) gene, complete cds
• rRNA Operon Nucleotide:KC244777
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 16S ribosomal RNA gene, complete sequence
• rRNA Operon Nucleotide:EF373992
  Aeromonas salmonicida strain ATCC 33658 clone 1 16S-23S ribosomal RNA intergenic spacer, complete sequence
• Gene Nucleotide:FJ178281
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 luxR family response regulator pseudogene, partial sequence
• Gene Nucleotide:FJ178239
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 predicted Fe-S-cluster redox enzyme gene, partial cds; and pilus assembly protein TapF (tapF) pseudogene, partial sequence
• Gene Nucleotide:FJ178255
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 flp pilus assembly protein FlpI (flpI) pseudogene, partial sequence
• Gene Nucleotide:FJ178262
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 flp pilus assembly protein FlpF (flpF) gene, partial cds; and flp pilus assembly protein FlpG (flpG) pseudogene, partial sequence
• Gene Nucleotide:FJ178292
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 P5G014-like protein pseudogene, partial sequence
• Gene Nucleotide:FJ178287
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 elastase (ahpB) pseudogene, partial sequence
• Gene Nucleotide:AF218037
  Aeromonas salmonicida RTX protein (asx) gene, complete cds
• Gene Nucleotide:AY294485
  Aeromonas salmonicida subsp. salmonicida DNA gyrase B (gyrB) gene, partial cds
• Gene Nucleotide:FJ178226
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 class II fumarate hydratase (fumC) gene, partial cds
• Gene Nucleotide:FJ178211
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 polysaccharide deacetylase pseudogene, partial sequence
• Gene Nucleotide:KC244775
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 DNA gyrase subunit B (gyrB) gene, partial cds
• Gene Nucleotide:FJ178217
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 sulfite reductase [NADPH] flavoprotein alpha-component (cysJ) pseudogene, partial sequence
• Gene Nucleotide:FJ178232
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 GGDEF domain protein pseudogene, partial sequence
• Gene Nucleotide:FJ178269
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 flp pilus assembly protein FlpB (flpB) pseudogene, partial sequence
• Gene Nucleotide:FJ178203
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 type IV pilus assembly protein (tapC) pseudogene, partial sequence
• rRNA Operon Nucleotide:X74681
  A.salmonicida salmonicida (ATCC 33658T) gene for 16S ribosomal RNA
• Gene Nucleotide:AM490880
  Aeromonas salmonicida subsp. salmonicida partial recA gene, strain ATCC 33658
• rRNA Operon Nucleotide:EF373991
  Aeromonas salmonicida strain ATCC 33658 clone 4 16S-23S ribosomal RNA intergenic spacer, complete sequence
• Gene Nucleotide:AY851098
  Aeromonas salmonicida strain ATCC 33658 RpoB (rpoB) gene, partial cds
• rRNA Operon Nucleotide:EF373990
  Aeromonas salmonicida clone 3 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence
• Gene Nucleotide:FJ178275
  Aeromonas salmonicida subsp. salmonicida strain ATCC 33658 catabolic acetolactate synthase (ilvB) pseudogene, partial sequence
• Genome Assembly:GCA_001643305
  Aeromonas salmonicida subsp. salmonicida ATCC 33658
• rRNA Operon Nucleotide:AY116916
  Aeromonas salmonicida strain ATCC 33658 internal transcribed spacer 1, complete sequence
• rRNA Operon Nucleotide:OR214944
  Aeromonas salmonicida strain ATCC 33658 16S ribosomal RNA gene, partial sequence.
• Gene Nucleotide:X80506
  A.salmonicida gene exeN and orf2
• rRNA Operon Nucleotide:X71836
  A.salmonicida (ssp. NCMB 1102) gene for 16S ribosomal RNA
• Gene Nucleotide:JN830095
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 elongation factor Ts (tsf) gene, partial cds
• Gene Nucleotide:JN829124
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 70 kDa heat shock protein (dnaK) gene, partial cds
• Gene Nucleotide:JN829513
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 DNA gyrase beta subuni (gyrB) gene, partial cds
• Gene Nucleotide:JN829318
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 citrate synthase (gltA) gene, partial cds
• Gene Nucleotide:JN829900
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 RNA polymerase beta subunit (rpoB) gene, partial cds
• rRNA Operon Nucleotide:JX014449
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JN830290
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 cell division protein ZipA (zipA) gene, partial cds
• Gene Nucleotide:JN829708
  Aeromonas salmonicida subsp. salmonicida strain CIP 103209 DNA repair protein RadA (radA) gene, partial cds
• Genome Assembly:GCA_000820065
  Aeromonas salmonicida subsp. salmonicida CIP 103209
• rRNA Operon Nucleotide:AB027541
  Aeromonas salmonicida subsp. salmonicida gene for 16S rRNA, strain: JCM 7874
• Gene Nucleotide:AB033450
  Aeromonas salmonicida sodB gene for iron-cofactored superoxide dismutase, partial cds, strain:JCM7874T,ATCC14174
• rRNA Operon Nucleotide:X60405
  Aeromonas salmonicida subsp. salmonicida 16S rRNA gene, strain NCIMB 1102
• Gene Nucleotide:HQ442441
  Aeromonas salmonicida strain CECT 894 DNA polymerase subunits gamma and tau (dnaX) gene, partial cds
• Gene Nucleotide:JN711820
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 DNA gyrase subunit beta (gyrB) gene, partial cds
• Gene Nucleotide:AY987630
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T 23S ribosomal RNA gene, complete sequence
• Gene Nucleotide:AY169327
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 RNA polymerase sigma-70 factor (rpoD) gene, partial cds
• Gene Nucleotide:JN215541
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 RNA polymerase sigma-70 factor (rpoD) gene, partial cds
• Gene Nucleotide:HQ442955
  Aeromonas salmonicida strain CECT 894 recA protein (recA) gene, partial cds
• Gene Nucleotide:HQ442680
  Aeromonas salmonicida strain CECT 894 DNA gyrase subunit beta (gyrB) gene, partial cds
• Gene Nucleotide:AY101773
  Aeromonas salmonicida strain CECT 894 DNA gyrase subunit beta (gyrB) gene, partial cds
• Gene Nucleotide:JN660361
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 recombinase A (recA) gene, complete cds
• Gene Nucleotide:HM163317
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 malate dehydrogenase (mdh) gene, complete cds
• rRNA Operon Nucleotide:AY987751
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T 16S ribosomal RNA gene, complete sequence
• Gene Nucleotide:AY987517
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T GyrB (gyrB) gene, partial cds
• Gene Nucleotide:HQ442537
  Aeromonas salmonicida strain CECT 894 ATP synthase F1 beta subunit (atpD) gene, partial cds
• Gene Nucleotide:HQ442979
  Aeromonas salmonicida strain CECT 894 chaperone Hsp40 (dnaJ) gene, partial cds
• Gene Nucleotide:HQ442843
  Aeromonas salmonicida strain CECT 894 RNA polymerase sigma-70 factor (rpoD) gene, partial cds
• Gene Nucleotide:JN215534
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 DnaJ (dnaJ) gene, partial cds
• Gene Nucleotide:AY764348
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T LuxR-type transcriptional regulator gene, complete cds
• Gene Nucleotide:FN179261
  Aeromonas salmonicida partial recA gene, type strain CECT 894T
• Gene Nucleotide:AY987688
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T RpoD (rpoD) gene, partial cds
• Gene Nucleotide:HQ443089
  Aeromonas salmonicida strain CECT 894 DNA gyrase subunit A (gyrA) gene, partial cds
• Gene Nucleotide:EU410320
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 flagellin A (flaA) gene, complete cds
• Gene Nucleotide:AY738408
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 ferrous superoxide dismutase (sodB) gene, partial cds
• Gene Nucleotide:AY987583
  Aeromonas salmonicida subsp. salmonicida strain CECT 894T LuxI-like protein gene, complete cds
• Gene Nucleotide:EU306828
  Aeromonas salmonicida subsp. salmonicida strain CECT 894 60 kDa chaperonin (cpn60) gene, partial cds
• Genome Assembly:GCA_900445115
  Aeromonas salmonicida NCTC12959

Associated Publications (2)

• DOI: 10.1099/00207713-44-3-416
  Ruimy R, Boussemart O, Christen R, Elbaze P, Lafay B, Gauthier M, Breittmayer V (1994). Phylogenetic Analysis and Assessment of the Genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas Deduced from Small-Subunit rRNA Sequences
• DOI: 10.3354/DAO035155
  Thornton J, Powell R, Austin B, Austin D (1999). Small subunit rRNA gene sequences of Aeromonas salmonicida subsp. smithia and Haemophilus piscium reveal pronounced similarities with A. salmonicida subsp. salmonicida

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID388.2

Retrieved 4 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:19069

Local history

• Registered 4 months ago
• Last modified 4 months ago