Strain sc|0019670

StrainInfo: SI-ID 44973 ^T

Taxon

Mycobacterium porcinum

Sample

Swine, lymph node

Cultures (7)

ATCC 33776 = CIP 105392 = CCUG 37674 = JCM 6378 = DSM 44242 = KCTC 9517 = CNCTC 7287

Other Designations (5)

E10241-1 = W7701 = Nemoto Tachikawa 96 = CNCTC My 324/88 = Tsukamura 19508

Sequences (23)

• Gene Nucleotide:HQ285739
  Mycobacterium porcinum strain ATCC 33776 DNA gyrase A (gyrA) gene, partial cds
• rRNA Operon Nucleotide:U24541
  Mycolicibacterium porcinum 23S ribosomal RNA, partial sequence
• Gene Nucleotide:AY286463
  Mycobacterium porcinum strain ATCC 33776 RecA (recA) gene, partial cds
• Gene Nucleotide:JN682052
  Mycobacterium porcinum strain ATCC 33776 DNA recombination protein (recA) gene, partial cds
• Gene Nucleotide:AY496137
  Mycobacterium porcinum ATCC 33776 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:HQ285754
  Mycobacterium porcinum strain ATCC 33776 DNA gyrase B (gyrB) gene, partial cds
• rRNA Operon Nucleotide:AF480588
  Mycobacterium porcinum 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JF491326
  Mycobacterium porcinum strain ATCC 33776 GroEL (hsp65) gene, partial cds
• Gene Nucleotide:AY262737
  Mycobacterium porcinum strain CIP 105392 RpoB gene, complete cds
• Gene Nucleotide:AY458098
  Mycobacterium porcinum strain CIP 105392 RecA (recA) gene, complete cds
• Gene Nucleotide:AY458112
  Mycobacterium porcinum strain CIP 105392 superoxide dismutase (sodA) gene, partial cds
• Gene Nucleotide:AY458068
  Mycobacterium porcinum strain CIP 105392 65 kDa heat shock protein (hsp65) gene, partial cds
• rRNA Operon Nucleotide:AY457077
  Mycolicibacterium porcinum strain CIP 105392 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:FJ442849
  Mycobacterium porcinum strain CCUG 37674 preprotein translocase SecA1 (secA1) gene, partial cds
• Gene Nucleotide:AB014289
  Mycobacterium porcinum gyrB gene for DNA gyrase B subunit, partial cds, strain JCM 6378
• Gene Nucleotide:AY544857
  Mycobacterium porcinum strain DSM 44242 superoxide dismutase (sod) gene, partial cds
• rRNA Operon Nucleotide:AJ291598
  Mycobacterium porcinum internal transcribed spacer 1 (ITS1), strain DSM 44242 T
• Gene Nucleotide:AF547867
  Mycobacterium porcinum strain DSM 44242 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:EF686847
  Mycobacterium porcinum strain DSM 44242 SmpB (smpB) gene, partial cds
• Gene Nucleotide:AY544955
  Mycobacterium porcinum strain DSM 44242 RNA polymerase (rpoB) gene, partial cds
• rRNA Operon Nucleotide:AF547958
  Mycobacterium porcinum strain DSM 44242 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:DQ986089
  Mycobacterium porcinum strain DSM 44242 elongation factor Tu (tuf) gene, partial cds
• Genome Assembly:GCA_025823105
  Mycolicibacterium porcinum DSM 44242

Associated Publications (5)

• DOI: 10.1099/IJS.0.02743-0
  Schinsky MF, Wallace RJ, Daneshvar MI, Steigerwalt AG, Floyd MM, Mcneil MM, Wilson RW, Brenner DJ, Douglas MP, Brown JM, Morey RE, Butler WR, Brown-elliott BA (2004). Taxonomic variation in the Mycobacterium fortuitum third biovariant complex: description of Mycobacterium boenickei sp. nov., Mycobacterium houstonense sp. nov., Mycobacterium neworleansense sp. nov. and Mycobacterium brisbanense sp. nov. and recognition of Mycobacterium porcinum from human clinical isolates
• DOI: 10.3389/FMICB.2018.00067
  Gupta RS, Son J, Lo B (2018). Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera
• DOI: 10.1099/IJSEM.0.002711
  Oren A, Garrity G (2018). List of new names and new combinations previously effectively, but not validly, published
• DOI: 10.1128/JCM.39.10.3638-3648.2001
  Turenne CY, Kabani A, Tschetter L, Wolfe J (2001). Necessity of quality-controlled 16S rRNA gene sequence databases: identifying nontuberculous Mycobacterium species.
• DOI: 10.1128/JCM.40.2.707-711.2002
  Hamid ME, Goodfellow M, Mauch H, Landt O, Roth A, Kroppenstedt RM (2002). Differentiation between Mycobacterium farcinogenes and Mycobacterium senegalense strains based on 16S-23S ribosomal DNA internal transcribed spacer sequences.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID44973.2

Retrieved 3 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:19670

Local history

• Registered 26 days ago
• Last modified 3 days ago