Strain sc|0022281

StrainInfo: SI-ID 687 ^T

Taxon

Allorhizobium vitis

Sample

Grapevine, vitis vinifera (AU)

Cultures (14)

LMG 8750 = NCPPB 3554 = ATCC 49767 = ICMP 10752 = CIP 105853 = IFO 15140 = NBIMCC 3513 = IAM 14140 = CECT 4799 = NBRC 15140 = HAMBI 1817 = KACC 10777 = JCM 21033 = CFBP 5523

Other Designations (3)

K309 = Kerr K309 = Ophel K309

Sequences (35)

• Gene Nucleotide:AM295487
  Agrobacterium vitis partial pnp gene for polyribonucleotide nucleotidyltransferase, strain LMG 8750
• Gene Nucleotide:HQ823558
  Agrobacterium vitis strain LMG 8750 glutamine synthetase (glnA) gene, partial cds
• Gene Nucleotide:FM213294
  Agrobacterium vitis partial hrcA gene for heat-inducible transcription repressor, type strain LMG 8750T
• Gene Nucleotide:FM213198
  Agrobacterium vitis partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 8750T
• Gene Nucleotide:FM213246
  Agrobacterium vitis partial ribonuclease P RNA (rnpB gene), type strain LMG 8750T
• Gene Nucleotide:EF217308
  Agrobacterium vitis strain LMG 8750 RNA polymerase beta chain (rpoB) gene, partial cds
• rRNA Operon Nucleotide:X67225
  Agrobacterium vitis partial 16S rRNA gene, strain LMG 8750
• Gene Nucleotide:EU812068
  Agrobacterium vitis strain LMG 8750 FusA (fusA) gene, partial cds
• Gene Nucleotide:AM295392
  Agrobacterium vitis partial rpoB gene for RNA polymerase beta subunit, strain LMG 8750
• rRNA Operon Nucleotide:AF345279
  Rhizobium vitis strain LMG 8750 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence
• Gene Nucleotide:AM418788
  Agrobacterium vitis partial atpD gene for ATP synthase beta subunit, strain LMG 8750
• Gene Nucleotide:FM213148
  Agrobacterium vitis partial rpoD gene for RNA polymerase sigma factor, type strain LMG 8750T
• Gene Nucleotide:AF209071
  Agrobacterium vitis strain LMG 8750 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AM295441
  Agrobacterium vitis partial gap gene for glyceraldehyde 3-phosphate dehydrogenase, strain LMG 8750
• Gene Nucleotide:AM418835
  Agrobacterium vitis partial gyrB gene for DNA gyrase subunit beta, strain LMG 8750
• rRNA Operon Nucleotide:D14502
  Agrobacterium vitis gene for 16S ribosomal RNA, complete sequence
• Gene Nucleotide:AB253258
  Agrobacterium tumefaciens rpoD gene for RNA polymerase sigma factor RpoD, partial cds, strain: NCPPB 3554
• Gene Nucleotide:AB253194
  Agrobacterium tumefaciens recA gene for RecA protein, partial cds, strain: NCPPB 3554
• rRNA Operon Nucleotide:AB288343
  Agrobacterium vitis genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 5' end fragment of 23S rRNA, IVS, fragment of 23S rRNA, partial and complete sequence, strain: NCPPB 3554
• Gene Nucleotide:AB465439
  Agrobacterium vitis plasmid pTi virC gene, partial cds, strain: NCPPB 3554
• Gene Nucleotide:AB253130
  Agrobacterium tumefaciens pyrG gene for CTP synthase, partial cds, strain: NCPPB 3554
• rRNA Operon Nucleotide:U45329
  Agrobacterium vitis ribosomal operon 16S rRNA, 23S rRNA, 5S rRNA, Ile-tRNA, Ala-tRNA, fMet-tRNA genes, complete sequences
• Genome Assembly:GCA_001541345
  Agrobacterium vitis NCPPB 3554
• Gene Nucleotide:AY752739
  Agrobacterium vitis strain ATCC 49767 DnaK gene, complete cds
• Gene Nucleotide:AY244370
  Agrobacterium vitis strain ATCC 49767 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:KJ093489
  Agrobacterium vitis strain ATCC 49767 VirD2 gene, partial cds
• Gene Nucleotide:JX064196
  Agrobacterium vitis hypothetical protein (SMc00019) gene, partial cds
• Gene Nucleotide:JX064268
  Agrobacterium vitis TruA (truA) gene, partial cds
• Gene Nucleotide:JX064340
  Agrobacterium vitis ThrA (thrA) gene, partial cds
• Gene Nucleotide:AY244374
  Agrobacterium vitis strain IAM 14140 23S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:D12795
  Agrobacterium vitis gene for 16S rRNA, strain: IAM 14140
• rRNA Operon Nucleotide:AB680777
  Agrobacterium vitis gene for 16S rRNA, partial sequence, strain: NBRC 15140
• Gene Nucleotide:KF206929
  Agrobacterium vitis strain HAMBI 1817 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:KF206651
  Agrobacterium vitis strain HAMBI 1817 glutamine synthetase type I (glnA) gene, partial cds
• Gene Nucleotide:KF206820
  Agrobacterium vitis strain HAMBI 1817 recombinase A (recA) gene, partial cds

Associated Publications (4)

• DOI: 10.1099/00207713-51-1-89
  Young JM, Kuykendall LD, Kerr A, Martínez-romero E, Sawada H (2001). A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis.
• DOI: 10.1099/IJSEM.0.001585
  Oren A, Garrity GM (2016). List of new names and new combinations previously effectively, but not validly, published
• DOI: 10.1099/00207713-40-3-236
  Ophel K, Kerr A (1990). Agrobacterium vitis sp. nov. for Strains of Agrobacterium biovar 3 from Grapevines
• DOI: 10.1016/J.SYAPM.2014.12.003
  Mousavi SA, De lajudie P, Willems A, Nesme X, Lindström K (2015). Revised phylogeny of Rhizobiaceae: Proposal of the delineation of Pararhizobium gen. nov., and 13 new species combinations

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID687.2

Retrieved 4 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:22281

Local history

• Registered 4 months ago
• Last modified 4 months ago