Strain sc|0022398

StrainInfo: SI-ID 3935

Taxon

Pseudomonas chlororaphis (not Pseudomonas chlororaphis subsp. aureofaciens)

Sample

Maas River clay suspended in kerosene for three weeks (NL)

Cultures (27)

LMG 1245 = ATCC 13985 = CCUG 712 = IAM 12353 = IFO 3521 = NRRL B-1576 = LMG 16909 = DSM 6698 = NCIMB 9030 = NCTC 10686 = CIP 103295 = NCIB 9030 = LMD 37.26 = LMD 37.27 = ICMP 13610 = CECT 462 = CCRC 11057 = CFBP 2133 = CCM 4973 = NCCB 37026 = NCCB 37027 = NBRC 3521 = BCRC 11057 = KCTC 12349 = NCIM 2026 = CGMCC 1.3351 = JCM 20509

Other Designations (19)

CCEB 518 = Delft L4788 = FIRDI 1057 = PD 1585 = CCEB 649 = Sneath D-297 = USCC 1335 = Delft E.III.9.26.1 = Bouman 2 = USCC 2033 = Stanier 38 = P.H.A. Sneath D-297 = R. Stanier 38 = NRRL BB-1576 = H. Bouman 2 = Delft L8 = Bouman 1 = Delft E.III.9.25.1 = EIII.9.25.1

Sequences (31)

• Gene Nucleotide:JF901494
  Pseudomonas chlororaphis subsp. aureofaciens strain LMG 1245 peptidoglycan-associated lipoprotein OprL (oprL) gene, partial cds
• Gene Nucleotide:AJ717426
  Pseudomonas chlororaphis partial rpoB gene for DNA-directed RNA polymerase beta chain, strain LMG 1245T
• Gene Nucleotide:FN554172
  Pseudomonas chlororaphis subsp. aureofaciens partial gyrB gene for DNA gyrase subunit B, type strain LMG 1245T
• Gene Nucleotide:FN554453
  Pseudomonas chlororaphis subsp. aureofaciens partial rpoD gene for DNA-directed RNA polymerase subunit D, type strain LMG 1245T
• Gene Nucleotide:AF117961
  Pseudomonas chlororaphis subsp. aureofaciens strain LMG 1245 OprF (oprF) gene, complete cds
• Gene Nucleotide:JF901403
  Pseudomonas chlororaphis subsp. aureofaciens strain LMG 1245 major outer membrane lipoprotein I (oprI) gene, partial cds
• Gene Nucleotide:FM872385
  Pseudomonas chlororaphis partial aprX gene for alkaline metalloprotease, type strain LMG 1245T
• Genome Assembly:GCA_001269575
  Pseudomonas chlororaphis subsp. aureofaciens LMG 1245
• rRNA Operon Nucleotide:AF094722
  Pseudomonas chlororaphis subsp. aureofaciens strain ATCC 13985 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:EF685236
  Pseudomonas chlororaphis subsp. aureofaciens strain ATCC 13985 60 kDa chaperonin (cpn60) gene, partial cds
• Gene Nucleotide:AJ243397
  Pseudomonas chlororaphis subsp. aureofaciens partial bolA gene and ORF1 DNA
• Gene Nucleotide:AJ414211
  Pseudomonas aureofaciens partial carA gene for carbamoylphosphate synthetase small subunit
• Gene Nucleotide:FJ652662
  Pseudomonas chlororaphis strain ATCC 13985 AtpD (atpD) gene, partial cds
• rRNA Operon Nucleotide:FJ652608
  Pseudomonas chlororaphis strain ATCC 13985 16S ribosomal RNA (rrsA) gene, partial sequence
• Gene Nucleotide:FJ652635
  Pseudomonas chlororaphis strain ATCC 13985 RecA (recA) gene, partial cds
• Gene Nucleotide:AJ316146
  Pseudomonas chlororaphis partial recA gene, strain ICMP 13610
• Gene Nucleotide:FJ652689
  Pseudomonas chlororaphis strain ATCC 13985 RpoB (rpoB) gene, partial cds
• Gene Nucleotide:Z21945
  Pseudomonas chlororaphis subsp. aureofaciens nirK gene encoding copper-containing nitrite reductase
• Gene Nucleotide:FJ652716
  Pseudomonas chlororaphis strain ATCC 13985 GyrB (gyrB) gene, partial cds
• Gene Nucleotide:FJ652732
  Pseudomonas chlororaphis strain ATCC 13985 PhzF (phzF) gene, partial cds
• Genome Assembly:GCA_900104715
  Pseudomonas chlororaphis ATCC 13985
• Genome Assembly:GCA_008801625
  Pseudomonas chlororaphis subsp. aureofaciens CCUG 712
• rRNA Operon Nucleotide:D84008
  Pseudomonas chlororaphis gene for 16S rRNA, partial sequence
• rRNA Operon Nucleotide:AJ308300
  Pseudomonas chlororaphis subsp. aureofaciens partial 16S rRNA gene, type strain ICMP 13610T
• rRNA Operon Nucleotide:Z76656
  Pseudomonas chlororaphis subsp. aureofaciens 16S rRNA gene
• rRNA Operon Nucleotide:AY509898
  Pseudomonas chlororaphis subsp. aureofaciens strain DSM 6698 16S ribosomal RNA gene, complete sequence
• Genome Assembly:GCA_003851905
  Pseudomonas chlororaphis subsp. aureofaciens DSM 6698
• Genome Assembly:GCA_900455495
  Pseudomonas chlororaphis NCTC10686
• rRNA Operon Nucleotide:AB680099
  Pseudomonas chlororaphis subsp. aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 3521
• Genome Assembly:GCA_000813225
  Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521
• Gene Nucleotide:FJ693714
  Pseudomonas chlororaphis subsp. chlororaphis strain KCTC 12349 type II PHA synthase 1 (phaC1) gene, complete cds

Associated Publications (2)

• DOI: 10.1016/j.mimet.2010.10.009
  Isobe K, Koba K, Ueda S, Senoo K, Harayama S, Suwa Y (2010). A simple and rapid GC/MS method for the simultaneous determination of gaseous metabolites.
• DOI: 10.3389/fpls.2020.604898
  Sacristan-Perez-Minayo G, Lopez-Robles DJ, Rad C, Miranda-Barroso L (2020). Microbial Inoculation for Productivity Improvements and Potential Biological Control in Sugar Beet Crops.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID3935.3

Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:22398

Local history

• Registered 8 months ago
• Last modified about 1 month ago