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Strain sc|0025617

Name

Photobacterium aquimaris

Strain numbers

DSM 23343 = KCTC 22356 = LC2-065 = NBRC 104633

StrainInfo: SI-ID 362827 T

Taxon
Photobacterium aquimaris
Sample
Seawater (JP)
Cultures (4)
KCTC 22356 = NBRC 104633 = LMG 26951 = DSM 23343
Other Designations (3)
CAIM 1844 = strain LC2-065 = LC2-065
Sequences (12)
  • rRNA Operon Nucleotide:AB682215
    Photobacterium aquimaris gene for 16S rRNA, partial sequence, strain: NBRC 104633
  • Gene Nucleotide:AB453690
    Photobacterium aquimaris topA gene for topoisomerase I, partial cds, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:AB428885
    Photobacterium aquimaris gapA gene for glyceraldehyde-3-phosphate dehydrogenase, partial cds, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:AB453694
    Photobacterium aquimaris mreB gene for rod shaping protein, partial cds, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:AB428891
    Photobacterium aquimaris luxA gene for alpha subunit luciferase, partial cds, strain: LC2-065 (= NBRC 104633)
  • rRNA Operon Nucleotide:AB428873
    Photobacterium aquimaris gene for 16S rRNA, partial sequence, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:AB453684
    Photobacterium aquimaris pyrH gene for uridylate kinase, partial cds, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:JQ229765
    Photobacterium aquimaris strain NBRC 104633 plasmid transfer protein (traH), putative resolvase (resR), acyl-CoA reductase (luxC), myristoyl transferase (luxD), alpha subunit luciferase (luxA), luciferase beta subunit (luxB), LuxF (luxF), acyl-protein synthetase (luxE), putative flavin reductase (luxG), RibE (ribE), RibB (ribB), and riboflavin synthase subunit beta (ribH) genes, complete cds; and RibA (ribA) gene, partial cds
  • Gene Nucleotide:AB453686
    Photobacterium aquimaris ftsZ gene for cell division protein, partial cds, strain: LC2-065 (= NBRC 104633)
  • Gene Nucleotide:AB428879
    Photobacterium aquimaris gyrB gene for gyrase B subunit, partial cds, strain: LC2-065 (= NBRC 104633)
  • Genome Assembly:GCA_001676085
    Photobacterium aquimaris DSM 23343
  • Genome Assembly:GCA_003025415
    Photobacterium aquimaris DSM 23343
Associated Publications (2)
  • DOI: 10.1099/ijs.0.004309-0
    Yoshizawa S, Wada M, Kita-Tsukamoto K, Yokota A, Kogure K (2009). Photobacterium aquimaris sp. nov., a luminous marine bacterium isolated from seawater.
  • DOI: 10.1111/j.1758-2229.2012.00355.x
    Urbanczyk H, Furukawa T, Yamamoto Y, Dunlap PV (2012). Natural replacement of vertically inherited lux-rib genes of Photobacterium aquimaris by horizontally acquired homologues.
Outside links and data sources
Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL
https://seqco.de/s:25617
Local history
  • Registered 8 months ago
  • Last modified about 1 month ago
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