Strain sc|0026595

StrainInfo: SI-ID 47074 ^T

Taxon

Allochromatium vinosum^T

Sample

Ditch water

Cultures (5)

DSM 180 = ATCC 17899 = NCIMB 10441 = KCTC 2671 = NBRC 103801

Other Designations (5)

Roelofsoen D = C.B. van Niel = RoelofsenD = SMG 180 = RoelofsenD ATCC17899

Sequences (28)

• Gene Nucleotide:FJ812049
  Allochromatium vinosum DSM 180 sulfate thioesterase/sulfate thiohydrolase (soxB) gene, partial cds
• Gene Nucleotide:FJ812063
  Allochromatium vinosum DSM 180 elongation factor EF-G (fusA) gene, partial cds
• Genome Assembly:GCA_000025485
  Allochromatium vinosum DSM 180
• rRNA Operon Nucleotide:FJ823965
  Allochromatium vinosum DSM 180 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:U84759
  Allochromatium vinosum sulfate adenylyltransferase (sat), putative adenylylsulfate reductase membrane anchor (aprM), adenylylsulfate reductase beta subunit (aprB), and adenylylsulfate reductase alpha subunit (aprA) genes, complete cds
• Gene Nucleotide:U81381
  Chromatium vinosum high potential iron-sulfur protein precursor (hip) gene, complete cds
• Gene Nucleotide:AB205104
  Allochromatium vinosum phaE, phaC genes for PHA synthase, complete cds
• Gene Nucleotide:EF618570
  Allochromatium vinosum strain DSM 180 sulfate thioesterase/sulfate thiohydrolase (soxB) gene, partial cds
• Gene Nucleotide:FN257131
  Allochromatium vinosum partial pufL gene and partial pufM gene, type strain DSM 180T
• Gene Nucleotide:U84761
  Chromatium vinosum adenylylsulfate reductase membrane anchor (aprM) gene, complete cds
• Gene Nucleotide:U84760
  Allochromatium vinosum dsr locus, complete sequence; and RuvB gene, partial cds
• Gene Nucleotide:HQ637536
  Allochromatium vinosum DSM 180 molecular chaperone DnaK (dnaK) gene, partial cds
• Gene Nucleotide:AF163765
  Allochromatium vinosum putative transcriptional regulator CysB (cysB) gene, partial cds; hydrogen sulfide:ferredoxin oxidoreductase (cysI), APS reductase (cysH), putative ATP sulfurylase small subunit (cysD), and putative ATP sulfurylase large subunit (cysN) genes, complete cds; and putative selenophosphate synthase (selD) gene, partial cds
• Gene Nucleotide:FJ823953
  Allochromatium vinosum DSM 180 recombinase A (recA) gene, partial cds
• Gene Nucleotide:FJ812056
  Allochromatium vinosum DSM 180 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (cbbL-1) gene, partial cds
• rRNA Operon Nucleotide:FM178268
  Allochromatium vinosum partial 16S rRNA gene, type strain DSM 180T
• Gene Nucleotide:FJ823959
  Allochromatium vinosum DSM 180 DNA gyrase (gyrB) gene, partial cds
• Gene Nucleotide:FJ812042
  Allochromatium vinosum DSM 180 photosynthetic reaction center M subunit (pufM) gene, partial cds
• Gene Nucleotide:AF031149
  Chromatium vinosum flavocytochrome c flavoprotein subunit precursor (fccB) gene, complete cds
• Gene Nucleotide:GU166436
  Allochromatium vinosum DSM 180 flagellar basal body-associated protein (fliL) and flagellar motor switch protein (fliM) genes, partial cds
• Gene Nucleotide:FJ812070
  Allochromatium vinosum DSM 180 chaperonin like family GroEL (groEL) gene, partial cds
• rRNA Operon Nucleotide:FJ812038
  Allochromatium vinosum DSM 180 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AF017118
  Chromatium vinosum sulfur globule protein Cv3 precursor (sgp3) gene, complete cds
• Gene Nucleotide:U45327
  Chromatium vinosum (kdtB) and ferredoxin (fdx) genes, complete cds
• Gene Nucleotide:AF025952
  Chromatium vinosum sulfur globule protein Cv2 precursor (sgp2) gene, complete cds
• Gene Nucleotide:FJ823946
  Allochromatium vinosum DSM 180 transcription-repair coupling factor (mfd) gene, partial cds
• Gene Nucleotide:AF017119
  Chromatium vinosum MoxR homolog gene, partial cds; sulfur globule protein Cv1 precursor (sgp1) gene, complete cds; and biotin carboxylase homolog gene, partial cds
• rRNA Operon Nucleotide:D90204
  Allochromatium vinosum rbcL and rbcS genes for large and small subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase, complete cds

Associated Publications (10)

• DOI: 10.1099/13500872-142-12-3363
  Dahl C (1996). Insertional gene inactivation in a phototrophic sulphur bacterium: APS-reductase-deficient mutants of Chromatium vinosum.
• DOI: 10.1016/s0167-4781(97)00033-x
  Bruser T, Truper HG, Dahl C (1997). Cloning and sequencing of the gene encoding the high potential iron-sulfur protein (HiPIP) from the purple sulfur bacterium Chromatium vinosum.
• DOI: 10.1128/JB.187.4.1392-1404.2005
  Dahl C, Engels S, Pott-Sperling AS, Schulte A, Sander J, Lubbe Y, Deuster O, Brune DC (2005). Novel genes of the dsr gene cluster and evidence for close interaction of Dsr proteins during sulfur oxidation in the phototrophic sulfur bacterium Allochromatium vinosum.
• DOI: 10.4056/sigs.2335270
  Weissgerber T, Zigann R, Bruce D, Chang YJ, Detter JC, Han C, Hauser L, Jeffries CD, Land M, Munk AC, Tapia R, Dahl C (2011). Complete genome sequence of Allochromatium vinosum DSM 180(T).
• DOI: 10.1128/JB.00154-13
  Weissgerber T, Dobler N, Polen T, Latus J, Stockdreher Y, Dahl C (2013). Genome-wide transcriptional profiling of the purple sulfur bacterium Allochromatium vinosum DSM 180T during growth on different reduced sulfur compounds.
• DOI: 10.1111/gbi.12221
  Tang T, Mohr W, Sattin SR, Rogers DR, Girguis PR, Pearson A (2017). Geochemically distinct carbon isotope distributions in Allochromatium vinosum DSM 180(T) grown photoautotrophically and photoheterotrophically.
• DOI: 10.1007/s00894-019-3945-3
  Ghosh S, Bagchi A (2019). Structural study to analyze the DNA-binding properties of DsrC protein from the dsr operon of sulfur-oxidizing bacterium Allochromatium vinosum.
• DOI: 10.1080/07391102.2020.1754914
  Ghosh S, Bagchi A (2020). Protein dynamics and molecular motions study in relation to molecular interaction between proteins from sulfur oxidizing proteobacteria Allochromatium vinosum.
• DOI: 10.3390/microorganisms12020391
  Petushkova E, Khasimov M, Mayorova E, Delegan Y, Frantsuzova E, Bogun A, Galkina E, Tsygankov A (2024). The Complete Genome of a Novel Typical Species Thiocapsa bogorovii and Analysis of Its Central Metabolic Pathways.
• Bol'shakov MA, Ashikhmin AA, Makhneva ZK, Moskalenko AA (2016). Effect of Illumination Intensity and Inhibition of Carotenoid Biosynthesis on Assembly of Peripheral Light-Gathering Complexes in Purple Sulfur Bacteria C Allochromatium vinosum ATCC 17899.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID47074.3

Retrieved 24 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:26595

Local history

• Registered 7 months ago
• Last modified 24 days ago