Strain sc|0029612

StrainInfo: SI-ID 377146 ^T

Taxon

Clostridioides difficile^T

Cultures (18)

LMG 15861 = ATCC 9689 = CCRC 10642 = CCUG 4938 = DSM 1296 = JCM 1296 = NCIMB 10666 = NCTC 11209 = CIP 104282 = NCIB 10666 = CECT 531 = KCTC 3264 = KCTC 5009 = LMG 21717 = BCRC 10642 = VTT E-001746 = VTT E-011964 = AS 1.2184

Other Designations (14)

DSMZ 1296 = Clark 90556-M6S = LMG21717T QC 6/04 = Carlier 10008 = 1780 = CCTM La 3397 = E-001746 = L.S. McClung 1780 = Mc Clung 1780 = USDA 90556-M6S = LMG21717T QC oorspr = McClung 1780 = 90556-M6S = 10008

Sequences (25)

• rRNA Operon Nucleotide:AB075770
  Clostridium difficile gene for 16S rRNA, partial sequence, strain: ATCC 9689
• rRNA Operon Nucleotide:S51968
  {16S/23S ribosomal DNA spacer region} [Clostridium difficile, ATCC 9689, Genomic, 271 nt]
• Gene Nucleotide:X94328
  C.difficile spo0A gene
• Gene Nucleotide:AB605620
  Clostridium difficile srl gene for Srl, complete cds
• Gene Nucleotide:KC292070
  Clostridium difficile ATCC 9689 toxin A (tcdA) gene, complete cds
• Gene Nucleotide:AY157531
  Clostridium difficile strain ATCC 9689 sigma K (sigK) gene, complete cds
• Gene Nucleotide:AY922372
  Clostridium difficile 60 kDa chaperonin (cpn60) gene, partial cds
• Gene Nucleotide:KC292135
  Clostridium difficile ATCC 9689 toxin B (tcdB) gene, complete cds
• Gene Nucleotide:U43514
  Clostridium difficile putative spoIVB (spoIVB) gene, complete cds, and phosphorylation-activated transcription factor spo0A (spo0a) gene, complete cds
• Gene Nucleotide:AY700149
  Clostridium difficile strain ATCC 9689 triosephosphate isomerase (tpi) gene, partial cds
• Gene Nucleotide:U36481
  Clostridium difficile sporulation protein homolog (spo0A) gene, partial cds
• rRNA Operon Nucleotide:NR_112172
  Clostridioides difficile ATCC 9689 = DSM 1296 16S ribosomal RNA, partial sequence
• Genome Assembly:GCA_001077535
  Clostridioides difficile ATCC 9689 = DSM 1296 DSM 1296T
• Genome Assembly:GCA_000438845
  Clostridioides difficile ATCC 9689 = DSM 1296
• Genome Assembly:GCA_000376285
  Clostridioides difficile ATCC 9689 = DSM 1296
• Gene Nucleotide:AY772817
  Clostridium difficile (R)-2-hydroxyisocaproate dehydrogenase (ldhA) gene, partial cds
• Gene Nucleotide:AY772818
  Clostridium difficile 2-hydroxyisocaproate CoA-transferase (hadA) gene, partial cds
• Gene Nucleotide:AJ543426
  Clostridium difficile partial hpdC gene of 4-hydroxyphenylacetate decarboxylase operon, regulatory subunit
• Gene Nucleotide:AY772815
  Clostridium difficile activator of 2-hydroxyisocaproyl-CoA dehydratase (hadI) gene, partial cds
• Gene Nucleotide:AJ543427
  Clostridium difficile partial hpdA gene of 4-hydroxyphenylacetate decarboxylase, activating enzyme operon
• rRNA Operon Nucleotide:HM245939
  Clostridium difficile strain DSM 1296 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:FJ498879
  Clostridium difficile strain DSM 1296 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY772816
  Clostridium difficile 2-hydroxyisocaproyl-CoA dehydratase (hadB) gene, complete cds; and 2-hydroxyacyl-CoA dehydratase (hadC) gene, partial cds
• Gene Nucleotide:AJ543425
  Clostridium difficile partial hpdB gene of 4-hydroxyphenylacetate decarboxylase operon, catalytic subunit
• rRNA Operon Nucleotide:AB548672
  [Clostridium] difficile gene for 16S ribosomal RNA, partial sequence, strin: JCM 1296

Associated Publications (7)

• DOI: 10.1128/IAI.25.1.191-201.1979
  Rolfe RD, Finegold SM (1979). Purification and characterization of Clostridium difficile toxin.
• DOI: 10.1128/IAI.33.1.67-74.1981
  Florin I, Thelestam M (1981). Intoxication of cultured human lung fibroblasts with Clostridium difficile toxin
• DOI: 10.1128/JCM.15.4.688-702.1982
  Cato EP, Moore WE, Holdeman LV, Hash DE (1982). Electrophoretic study of Clostridium species.
• DOI: 10.1007/BF00425340
  Elsden SR, Waller JM, Hilton MG (1976). The end products of the metabolism of aromatic amino acids by clostridia
• DOI: 10.1111/J.1574-6968.1993.TB06493.X
  Lawson PA, Hippe H, Hutson RA, Collins MD, Llop-Perez P (1993). Towards a phylogeny of the clostridia based on 16S rRNA sequences.
• DOI: 10.1016/J.ANAEROBE.2016.06.008
  Lawson PA, Tyrrell KL, Citron DM, Finegold SM (2016). Reclassification of Clostridium difficile as Clostridioides difficile (Hall and O’Toole 1935) Prévot 1938
• DOI: 10.1099/IJSEM.0.001321
  Oren A, Garrity GM (2016). List of new names and new combinations previously effectively, but not validly, published

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID377146.2

Retrieved 8 days ago via StrainInfo API (CC BY 4.0)

StrainInfo: SI-ID 9651 ^T

Taxon

Bifidobacterium longum subsp. suis (not Clostridioides difficile^T)

Sample

Pig, faeces

Cultures (13)

LMG 11598 = DSM 20211 = CIP 103377 = JCM 1269 = CCRC 14671 = LMG21814 = HAMBI 1381 = NRRL B-41407 = CGMCC 1.2184 = ATCC 27533 = BCRC 14671 = CCUG 35234 = VTT E-021921

Other Designations (6)

Scardovi SU859 = CUETM 89/42 = SU 859 = LMG 21814T QC om = LMG 21814T QC 1/03 = SU859

Sequences (12)

• rRNA Operon Nucleotide:GQ487646
  Bifidobacterium longum subsp. suis strain DSM 20211 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY377411
  Bifidobacterium longum strain DSM 20211 putative xylulose 5-phosphate/fructose 6-phosphate phosphoketolase (xfp) gene, partial cds
• Gene Nucleotide:AY585253
  Bifidobacterium longum bv. Suis GroES gene, partial cds
• Gene Nucleotide:AY013248
  Bifidobacterium suis heat shock protein 60 (hsp60) gene, partial cds
• rRNA Operon Nucleotide:AB116353
  Bifidobacterium longum subsp. suis gene for 16S rRNA, partial sequence, strain: JCM 1269
• Gene Nucleotide:AY642883
  Bifidobacterium longum bv. Suis JCM 1269 GrpE (grpE) gene, partial cds
• Gene Nucleotide:AY642869
  Bifidobacterium longum bv. Suis JCM 1269 DnaK (dnaK) gene, partial cds
• rRNA Operon Nucleotide:AB507104
  Bifidobacterium longum gene for 16S rRNA, partial sequence, strain: JCM 1269
• rRNA Operon Nucleotide:LC071805
  Bifidobacterium longum subsp. suis gene for 16S ribosomal RNA, partial sequence, strain: JCM 1269.
• Gene Nucleotide:JQ696822
  Bifidobacterium longum subsp. suis strain NRRL B-41407 bile salt hydrolase gene, partial cds
• Gene Nucleotide:AY487151
  Bifidobacterium longum bv. Suis strain ATCC 27533 ATP synthase beta chain (atpD) gene, partial cds
• rRNA Operon Nucleotide:M58743
  Bifidobacterium longum subsp. suis strain ATCC 27533 16S ribosomal RNA gene, partial sequence.

Associated Publications (8)

• DOI: 10.1099/00207713-52-6-1945
  Sakata S, Hayashi H, Fukuyama M, Benno Y, Kitahara M, Sakamoto M (2002). Unification of Bifidobacterium infantis and Bifidobacterium suis as Bifidobacterium longum.
• DOI: 10.1002/JOBM.3630110504
  Matteuzzi D, Crociani F, Trovatelli LD, Zani O (1971). Bifidobacterium suis n. sp.: A new species of the genusBifidobacterium isolated from pig faces
• DOI: 10.1099/IJS.0.65319-0
  Mattarelli P, Bonaparte C, Biavati B, Pot B (2008). Proposal to reclassify the three biotypes of Bifidobacterium longum as three subspecies: Bifidobacterium longum subsp. longum subsp. nov., Bifidobacterium longum subsp. infantis comb. nov. and Bifidobacterium longum subsp. suis comb. nov.
• DOI: 10.1099/IJS.0.2008/004069-0
  Euzéby J (2008). Notification that new names and new combinations have appeared in volume 58, part 4, of the IJSEM.
• DOI: 10.1016/S0723-2020(83)80033-2
  Lauer E, Kandler O (1983). DNA-DNA Homology, Murein Types and Enzyme Patterns in the Type Strains of the Genus Bifidobacterium
• DOI: 10.1016/0923-2508(96)80218-X
  Mangin I, Bourget N, Decaris B (1996). Ribosomal DNA polymorphism in the genus Bifidobacterium.
• DOI: 10.1099/00207713-40-1-100
  Lauer E (1990). Bifidobacterium gallicum sp. nov. Isolated from Human Feces
• DOI: 10.1007/BF00409030
  Scardovi V, Zani G, Trovatelli LD (1970). Deoxyribonucleic acid homology among the species of the genus Bifidobacterium isolated from animals.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID9651.2

Retrieved 8 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:29612

Local history

• Registered 18 days ago
• Last modified 8 days ago