Strain sc|0030350

StrainInfo: SI-ID 36980 ^T

Taxon

Mycobacterium smegmatis

Sample

Plant Industry Station (US)

Cultures (13)

ATCC 19420 = NCTC 8159 = CCUG 21002 = CCUG 21815 = JCM 5866 = CIP 104444 = DSM 43756 = KCTC 9108 = VKM Ac-1239 = CECT 3020 = JCM 6386 = NRRL B-14616 = CNCTC 7294

Other Designations (11)

Gordon = Vincent 14 133 0010 = CNCTC My 320/87 = Hagan = DSMZ 43756 = Lind MS766 = Ridell GA735 = MNC13 = Ridell GB576 = Cornell 3 = 14 133 0010

Sequences (44)

• rRNA Operon Nucleotide:AJ131761
  Mycobacterium smegmatis 16S rRNA gene, strain ATCC 19420
• rRNA Operon Nucleotide:AF059846
  Mycolicibacterium smegmatis strain ATCC 19420 16S ribosomal RNA (rrs), partial sequence
• Gene Nucleotide:AY724726
  Mycobacterium smegmatis strain ATCC 19420 preprotein translocase SecA1 (secA1) gene, partial cds
• Gene Nucleotide:AY262735
  Mycobacterium smegmatis strain ATCC 19420 RpoB gene, complete cds
• Gene Nucleotide:AY458120
  Mycobacterium smegmatis strain ATCC 19420 superoxide dismutase (sodA) gene, partial cds
• Gene Nucleotide:AF057485
  Mycobacterium smegmatis RNA polymerase beta (rpoB) gene, partial cds
• rRNA Operon Nucleotide:AY457078
  Mycolicibacterium smegmatis strain ATCC 19420 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JF491307
  Mycobacterium smegmatis strain ATCC 19420 GroEL (hsp65) gene, partial cds
• Gene Nucleotide:AY458101
  Mycobacterium smegmatis strain ATCC 19420 RecA (recA) gene, complete cds
• Gene Nucleotide:AY286464
  Mycobacterium smegmatis strain ATCC 19420 RecA (recA) gene, partial cds
• Gene Nucleotide:GU362494
  Mycobacterium smegmatis strain ATCC 19420 DNA-directed RNA polymerase subunit beta (rpoB) and DNA-directed RNA polymerase subunit beta' (rpoC) genes, partial cds
• Gene Nucleotide:AY458065
  Mycobacterium smegmatis strain ATCC 19420 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:AF060354
  Mycobacterium smegmatis RNA polymerase beta-subunit (rpoB) gene, partial cds
• Gene Nucleotide:GU362451
  Mycobacterium smegmatis strain ATCC 19420 molecular chaperone DnaK (dnaK) gene, partial cds
• Genome Assembly:GCA_029222015
  Mycolicibacterium smegmatis ATCC 19420
• rRNA Operon Nucleotide:X76258
  M.smegmatis (NCTC 8159) genes for 23S and 5S ribosomal RNA partial (149bp)
• rRNA Operon Nucleotide:X76256
  M.smegmatis (NCTC 8159) gene for 16S ribosomal RNA partial (238bp)
• Gene Nucleotide:X92578
  M.smegmatis gene for 32 kDa protein (partial)
• Gene Nucleotide:U63095
  Mycobacterium smegmatis acetamidase regulator gene, complete cds
• rRNA Operon Nucleotide:X76255
  M.smegmatis (NCTC 8159) gene for 16S ribosomal RNA partial (207bp)
• Gene Nucleotide:AJ312211
  Mycobacterium smegmatis partial mRNA for tyrosyl-tRNA synthetase (tyrS gene), strain NCTC 8159
• rRNA Operon Nucleotide:X76257
  M.smegmatis (NCTC 8159) genes for 16S and 23s ribosomal RNA partial (381bp)
• Gene Nucleotide:X57175
  M.smegmatis gene for acetamidase
• Gene Nucleotide:AJ312210
  Mycobacterium smegmatis partial 3-mag gene for 3-methylpurine DNA glycosylase, strain NCTC 8159
• Genome Assembly:GCA_001457595
  Mycolicibacterium smegmatis NCTC8159
• Gene Nucleotide:FJ442851
  Mycobacterium smegmatis strain CCUG 21002 preprotein translocase SecA1 (secA1) gene, partial cds
• rRNA Operon Nucleotide:X55251
  M.smegmatis 5S rRNA
• Gene Nucleotide:AY544964
  Mycobacterium smegmatis strain CIP 104444 RNA polymerase (rpoB) gene, partial cds
• Gene Nucleotide:AY544865
  Mycobacterium smegmatis strain CIP 104444 superoxide dismutase (sod) gene, partial cds
• rRNA Operon Nucleotide:AF547967
  Mycobacterium smegmatis strain CIP 104444 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:DQ480326
  Mycobacterium smegmatis strain CIP 104444 tmRNA (ssrA) gene, partial sequence
• Gene Nucleotide:AF547876
  Mycobacterium smegmatis strain CIP 104444 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:DQ986129
  Mycobacterium smegmatis strain CIP 104444 elongation factor Tu (tuf) gene, partial cds
• Gene Nucleotide:EF686852
  Mycobacterium smegmatis strain CIP 104444 SmpB (smpB) gene, partial cds
• Gene Nucleotide:AF001493
  Mycobacterium smegmatis rifampin ADP-ribosyl transferase (arr) gene, complete cds
• Gene Nucleotide:KF410572
  Mycobacterium smegmatis strain DSM 43756 preprotein translocase membrane subunit SecY (secY) gene, partial cds
• rRNA Operon Nucleotide:KF410356
  Mycobacterium smegmatis strain DSM 43756 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AJ291599
  Mycobacterium smegmatis internal transcribed spacer 1 (ITS1), strain DSM 43756 T
• Gene Nucleotide:KF410392
  Mycobacterium smegmatis strain DSM 43756 30S ribosomal protein S1 (rpsA) gene, partial cds
• rRNA Operon Nucleotide:AJ536041
  Mycobacterium smegmatis 16S rRNA gene
• Gene Nucleotide:KF410500
  Mycobacterium smegmatis strain DSM 43756 phosphoribosylformylglycinamide synthetase PurL (purL) gene, partial cds
• Gene Nucleotide:KF410536
  Mycobacterium smegmatis strain DSM 43756 RNA polymerase subunit beta' RpoC (rpoC) gene, partial cds
• Gene Nucleotide:KF410428
  Mycobacterium smegmatis strain DSM 43756 polynucleotide phosphorylase (pnp) gene, partial cds
• Gene Nucleotide:KF410464
  Mycobacterium smegmatis strain DSM 43756 amidophosphoribosyltransferase PurF (purF) gene, partial cds

Associated Publications (14)

• DOI: 10.1371/journal.pone.0029833
  Lamrabet O, Mba Medie F, Drancourt M (2012). Acanthamoeba polyphaga-enhanced growth of Mycobacterium smegmatis.
• DOI: 10.1016/s0378-1135(99)00002-4
  Talaat AM, Trucksis M, Kane AS, Reimschuessel R (1999). Pathogenicity of Mycobacterium fortuitum and Mycobacterium smegmatis to goldfish, Carassius auratus.
• DOI: 10.1053/jfms.2001.0189
  Alander-Damsten YK, Brander EE, Paulin LG (2003). Panniculitis, due to Mycobacterium smegmatis, in two Finnish cats.
• DOI: 10.1016/j.ejmech.2011.03.039
  Thomas KD, Adhikari AV, Chowdhury IH, Sumesh E, Pal NK (2011). New quinolin-4-yl-1,2,3-triazoles carrying amides, sulphonamides and amidopiperazines as potential antitubercular agents.
• DOI: 10.1016/j.bbrc.2019.07.117
  Sagong HY, Hong J, Kim KJ (2019). Crystal structure and biochemical characterization of O-acetylhomoserine acetyltransferase from Mycobacterium smegmatis ATCC 19420.
• DOI: 10.1099/00221287-139-3-575
  Mahenthiralingam E, Draper P, Davis EO, Colston MJ (1993). Cloning and sequencing of the gene which encodes the highly inducible acetamidase of Mycobacterium smegmatis.
• DOI: 10.1099/00221287-143-7-2267
  Parish T, Mahenthiralingam E, Draper P, Davis EO, Colston EO (1997). Regulation of the inducible acetamidase gene of Mycobacterium smegmatis.
• DOI: 10.3389/fmicb.2018.00067
  Gupta RS, Lo B, Son J (2018). Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera.
• DOI: 10.7164/antibiotics.48.1299
  Morisaki N, Kobayashi H, Iwasaki S, Furihata K, Dabbs ER, Yazawa K, Mikami Y (1995). Structure determination of ribosylated rifampicin and its derivative: new inactivated metabolites of rifampicin by mycobacterial strains.
• DOI: 10.1128/AAC.43.1.181
  Quan S, Imai T, Mikami Y, Yazawa K, Dabbs ER, Morisaki N, Iwasaki S, Hashimoto Y, Furihata K (1999). ADP-ribosylation as an intermediate step in inactivation of rifampin by a mycobacterial gene.
• DOI: 10.1089/mdr.1999.5.259
  Imai T, Watanabe K, Mikami Y, Yazawa K, Ando A, Nagata Y, Morisaki N, Hashimoto Y, Furihata K, Dabbs ER (1999). Identification and characterization of a new intermediate in the ribosylative inactivation pathway of rifampin by Mycobacterium smegmatis.
• DOI: 10.7164/antibiotics.53.269
  Morisaki N, Hashimoto Y, Furihata K, Imai T, Watanabe K, Mikami Y, Yazawa K, Ando A, Nagata Y, Dabbs ER (2000). Structures of ADP-ribosylated rifampicin and its metabolite: intermediates of rifampicin-ribosylation by Mycobacterium smegmatis DSM43756.
• DOI: 10.1128/JB.183.1.235-249.2001
  Naas T, Mikami Y, Imai T, Poirel L, Nordmann P (2001). Characterization of In53, a class 1 plasmid- and composite transposon-located integron of Escherichia coli which carries an unusual array of gene cassettes.
• DOI: 10.1128/AAC.47.10.3208-3213.2003
  Alexander DC, Jones JR, Liu J (2003). A rifampin-hypersensitive mutant reveals differences between strains of Mycobacterium smegmatis and presence of a novel transposon, IS1623.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID36980.3

Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:30350

Local history

• Registered 8 months ago
• Last modified about 1 month ago