JSON

Genome sc|0001038

Name

“Photobacterium acropomis”

Database

NCBI Assembly

Accession

GCA_030685555.1

Genomics

Accession
NCBI Assembly:GCA_030685555.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.9%
  • Contamination: 0.0%
  • Quality: 98.9
Ribosomal and transfer RNA genes
  • 19 16S rRNAs (up to 100.0%)
  • 19 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
65.0 ×
Source
Other features
  • G+C Content: 41.37%
  • Coding Density: 84.07%
  • Codon Table: 11
  • N50: 3,177,312 bp
  • Contigs: 3
  • Largest Contig: 3,177,312 bp
  • Assembly Length: 4,691,122 bp
  • Ambiguous Assembly Fraction: 0.0064%
Automated checks
Complete

Sample Metadata

Date
Not detected
Location
Lat Lon: 33.24 N 133.57 E
Toponym
Geo Loc Name: Japan: Tosa Bay
Environment
Env Broad Scale: marine
Env Local Scale: light organ
Env Medium: fish
Other
Host: Acropoma japonicum
Package
Ncbi Submission Package: MIGS.ba.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples
Metadata retrieved 8 months ago


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