Genome sc|0001334


Database

NCBI Assembly

Accession

GCA_017651625.1

Genomics

Accession
NCBI Assembly:GCA_017651625.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.75%
  • Contamination: 1.7%
  • Quality: 89.25
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
30.0 ×
Source
Other features
  • G+C Content: 31.9%
  • Coding Density: 93.83%
  • Codon Table: 11
  • N50: 74,235 bp
  • Contigs: 58
  • Largest Contig: 299,371 bp
  • Assembly Length: 1,879,970 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 5 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-11-22
Location
Lat Lon: not collected
Toponym
Geo Loc Name: not collected
Environment
Sample Type: metagenomic assembly
Isolation Source: ruminant gastrointestinal tract • digesta samples
Other
Host: yak • Yak
Package
Ncbi Submission Package: Microbe.1.0Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples

Metadata retrieved 5 days ago

Sequencing Experiments

luminal digesta samples


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