SeqCode Registry
cognitis nomina
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Genomes
sc|0001398
JSON
Genome sc|0001398
Name
“Spiroplasma holothuriicola”
Database
NCBI Assembly
Accession
GCA_002135175.2
Genomics
Accession
NCBI Assembly:
GCA_002135175.2
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
66.0%
Contamination:
0.9%
Quality:
61.5
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
50.0 ×
Source
BioSample: SAMN06368401
Other features
G+C Content:
27.4%
Coding Density:
89.82%
Codon Table:
4
N50:
280,592 bp
Contigs:
2
Largest Contig:
280,592 bp
Assembly Length:
424,539 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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