Genome sc|0001411


Database

NCBI Assembly

Accession

GCA_033470255.1

Genomics

Accession
NCBI Assembly:GCA_033470255.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 53.0%)
  • tRNAs for 20 amino acids
Sequencing depth
228.0 ×
Source
Other features
  • G+C Content: 48.57%
  • Coding Density: 90.84%
  • Codon Table: 11
  • N50: 2,053,444 bp
  • Contigs: 1
  • Largest Contig: 2,053,444 bp
  • Assembly Length: 2,053,444 bp
  • Ambiguous Assembly Fraction: 0.033%
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2021-08-29
Location
Lat Lon: 22.39 S 40.26 W
Toponym
Geo Loc Name: Brazil: Campos Basin, South Atlantic
Environment
Sample Type: metagenomic assembly
Isolation Source: Sponge tissue
Env Broad Scale: ENVO:00002030
Env Local Scale: ENVO:00000447
Env Medium: ENVO:00010483
Other
Not detected
Package
Ncbi Submission Package: MIMAG.host-associated.6.0
Biosamplemodel: MIMAG.host-associated
All retrieved samples

Metadata retrieved about 1 month ago

Sequencing Experiments

Metagenome from Aphrocallistes beatrix


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