Genome sc|0001448


Database

NCBI Assembly

Accession

GCA_002140975.1

Genomics

Accession
NCBI Assembly:GCA_002140975.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.9%
  • Quality: 90.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 3 23S rRNAs (up to 53.0%)
  • tRNAs for 20 amino acids
Sequencing depth
70.0 ×
Source
Other features
  • G+C Content: 37.92%
  • Coding Density: 85.87%
  • Codon Table: 11
  • N50: 576,736 bp
  • Contigs: 38
  • Largest Contig: 1,386,938 bp
  • Assembly Length: 4,646,638 bp
  • Ambiguous Assembly Fraction: 4.87%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Not detected
Toponym
Not detected
Environment
Isolation Source: intestinal contents
Other
Host: Insect
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples

Metadata retrieved 5 months ago


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