SeqCode Registry
cognitis nomina
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Genomes
sc|0001473
JSON
Genome sc|0001473
Database
INSDC Nucleotide
Accession
ERZ22156981
Genomics
Accession
INSDC Nucleotide:
ERZ22156981
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.0%
Contamination:
3.8%
Quality:
75.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
Sequencing depth
19.0 ×
Source
BioSample: SAMEA115040714
And 5 more…
Other features
G+C Content:
62.0%
Submitter comments
Completeness, contamination, strain heterogeneity, and GC-content were assessed by CheckM v1.2.2.
16S ribosomal RNA gene was recovered using barrnap v0.9.
It has a Strain heterogeneity of 16.7%
Automated checks
Failed: Cannot find ncbi:nuccore:ERZ22156981
Sample Metadata
BioSample entries
BioSample: SAMEA115040714
And 5 more…
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
SAMEA115040714
:
SAMEA115040715
:
SAMEA115040716
:
SAMEA115040717
:
SAMEA115040718
:
SAMEA115040719
:
Metadata retrieved
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
All sources
×
BioSample: SAMEA115040714
BioSample: SAMEA115040715
BioSample: SAMEA115040716
BioSample: SAMEA115040717
BioSample: SAMEA115040718
BioSample: SAMEA115040719
All entries
×
BioSample: SAMEA115040714
BioSample: SAMEA115040715
BioSample: SAMEA115040716
BioSample: SAMEA115040717
BioSample: SAMEA115040718
BioSample: SAMEA115040719
SAMEA115040714
×
SAMEA115040715
×
SAMEA115040716
×
SAMEA115040717
×
SAMEA115040718
×
SAMEA115040719
×
Search
×
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