Genome sc|0001493


Database

NCBI Assembly

Accession

GCA_900290375.1

Genomics

Accession
NCBI Assembly:GCA_900290375.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.0%
  • Contamination: 3.9%
  • Quality: 78.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 77.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 42.6%
  • Coding Density: 82.2%
  • Codon Table: 11
  • N50: 11,065 bp
  • Contigs: 971
  • Largest Contig: 94,466 bp
  • Assembly Length: 5,321,430 bp
  • Ambiguous Assembly Fraction: 0.027%
Submitter comments
See full comment
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2010-09-21
Location
Lat Lon: 50.131881 N 11.881046 E
Toponym
Geo Loc Name: Germany: Schloeppnerbrunnen fen II, Fichtel Mountains, northeastern Bavaria
Environment
Env Material: peat soil
Env Biome: fen
Other
Ph: 5-Apr
Depth: 0.1-0.2 m
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIGS.ba.soil.5.0
Biosamplemodel: MIGS/MIMS/MIMARKS.soil
All retrieved samples

Metadata retrieved 5 months ago


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