SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0000159
JSON
Genome sc|0000159
Name
Tyloplasma litorale
Ts
Database
INSDC Nucleotide
Accession
AP027078.1
Genomics
Accession
INSDC Nucleotide:
AP027078.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.0%
Quality:
100.0
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 19 amino acids
Sequencing depth
589.0 ×
Source
BioSample: SAMD00511451
Other features
G+C Content:
24.4%
Coding Density:
91.73%
Codon Table:
4
N50:
615,622 bp
Contigs:
1
Largest Contig:
615,622 bp
Assembly Length:
615,622 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2020
Location
Not detected
Toponym
Geo Loc Name:
Japan:Kyushu
Environment
Isolation Source:
not applicable
Other
Host:
not applicable
Package
Ncbi Submission Package:
Invertebrate.1.0
Biosamplemodel:
Invertebrate
All retrieved samples
SAMD00511451
: Tylos granuliferus Kyushu2020
Metadata retrieved
7 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMD00511451
×
collection_date
2020
isolate
Kyushu2020
INSDC secondary accession
DRS268096
NCBI submission package
Invertebrate.1.0
organism
Tylos granuliferus
host
not applicable
geo_loc_name
Japan:Kyushu
tissue
whole body
isolation_source
not applicable
sample_name
Tylos granuliferus Kyushu2020
sample derived_from
SAMD00511451
BioSampleModel
Invertebrate
ENA-FIRST-PUBLIC
2022-12-13
ENA-LAST-UPDATE
2023-11-05
Search
×
Names
Publications
Authors
Subjects